| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0495 |
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| Symbol | |
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| ID | 8418301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 600104 |
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| End bp | 602782 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037057 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_003197370 |
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| Protein GI | 258404628 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.221081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.759489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTA AAATGCGCGT GAGAGAATTG TCCAACGAAT TGGGCCTCTC CAATAAGGAA
CTTCTCCACC TGCTCAGAGA ACTGGGCATT CAGGTCAAAA GCCATATGAG CGGGCTTTCA
GATGACGAGG TGGATCAGGT GCGCCAACGT TTCCACGCAG GCAGCCAGAG CCAGGATTCG
GTGCAAAAAC GGACTACCCG CTCCGGGGTC ATCGTGCGCC GCAGACGGCG CGCTGCGAAA
AGCGAATCCG AGCCCGAGCC GCAACCGGCC GAAGAGCCGG AGGCCGAACC GGAAGCCGCG
GCAGAGGCCG CGGCAGCGGA ACCCCAGCCC GAACCCGCTC CCACCGCCCG GATTGTCGAA
CCGCCGCATG CGGACGAAGA GCCCGAGGAA GGTGAACCGG AAGCTGAAGA ACCGGAAGCT
GAGGAGCCCC AACACCCGGA GGAGACGACT CAGGCGGAAC CTGCACAGGA CACTGGCGTA
GCCCAGGAGC CTCAGGAGAC CGAAGAGACC ATTCAGGAGC AGCCCGCCGA GGACTCAGAA
GAGCCCTCTG AGACGGAAGC CGGGAAAAAG AAGAAGAAAA AGCGGAAAAA GAAACCGGAA
TCGCCGGCAG TCAAGGTCAT CTCCAAACCC GAGGTCACCG CTGAAGAGCC GGCACCAAGC
CCTGCTCCTG CCGAGGCAGC CGATACCGAG GCCGCTTCAA AGAAGAAAAA GAAAAAAGAC
AAGCGGGTAG TCGATTTCAG CAGCACGCCT GCCGAAGCCG AACCGCAAGA CAAACGCAAG
GCCTCGACCC AGTGGAAGAA AAAGAAAAGC GCCGGGGTCA AGGACAAAAC CGGAGGCAAG
GAACGTCGCC CGGGGCGCAA GCGTCAGCAG CAAGGCGGCA AGGCAGAACC GGTTCGCCCC
ACGACCCAGC CGACCAAGGC CTCAAAGCGT AAAATCAAGA TCGACGAAGC CATCCGTTTG
GGCGACTTGG CCAGGCAGCT GGGCGTCAAG GTGCAGGAAC TGATCAAGTC CCTGATGCAA
CTCGGCATCA TGGCCACTAT CAACCAATCC TTGGATATCG AGACCGCCAC AGTCCTGGCT
GAAGAATTCG GCTACGAAGT CGAAAAGGTC GGTTTTTCGG AAGATGAATT CATCCTGCCC
AAGGAAGAAG ACAACCCCGA AGCTCTTGAA CCACGCTGGC CGGTGGTCAC CATCATGGGC
CACGTCGACC ACGGTAAAAC CTCGCTTTTG GACGCCATCC GAGAGTCCAA GATCACGACA
AAAGAGGCCG GCGGCATCAC CCAGCATATC GGGGCCTATT ATGTCGGCAC GGATCGCGGC
GAACTTGTCT TCCTTGATAC GCCCGGCCAC GAAGCTTTCA CGGCCATGCG GGCCCGCGGA
GCGCAGGTCA CGGATATCGT CATCCTCGTG GTCGCCGCTG ACGACGGGGT CATGGACCAG
ACCCGTGAGG CCATCAACCA CTCCAAGGCC GCTGGCGTTC CGCTTATTGT AGCGGTCAAC
AAGATGGACA AAGAAAACGC CGACCCCGAG CGCGTCAAGC GCGAACTCGC CGAGTTCGAT
CTGGTCCCTG AGGAATGGGG CGGCGACACC ATTTACGCCT ATGTCTCGGC CAAGTCCCAC
TCCGGTCTCG ACGATTTGCT CGAGATGGTT CTCCTGCAGG CCGAGGTCCA GGAACTCAAG
GCCAACCCCG CCAAACGGGC CCGGGGCCAC ATTGTCGAGG CCAAACTCGA TAAGGGGCGC
GGCGCGGTCG GGACTGTCCT GGTCCAGGAA GGGACCCTGC ATCACGGCGA CGCCTTTGTC
TGCGGTCTTT ACCACGGGAA AGTCCGGGCC TTGTTCAACG ACCGGGGCAA GAACATCAAA
TCAGCCGGCC CCTCCATGCC GGTTGAGGTC CAGGGATTTG ACGGCGTCCC CGAGGCTGGC
GACGAATTCG TGGCCGTGCA GGACGACAAG GTTGCCCGGC GCATTGCCGA AGAACGGCAA
ACGAAGCAGC GGGAAAAGGA CTTGGCCAAG GAAACCAAGG TGACTTTGGA AAGCTTCATG
GCCGCCAAGG CCGACGAAGA GGTCAAATCC CTGAACCTGG TCATCAAAGC CGACGTCCAG
GGTTCCTTGG AGGCCTGCAT CGAGGCGGTT CGCAAATTGA GCACCGACGA GGTCAAAGTG
GAAATCATCC ACGGCGGTAC CGGGTCCATT TCCGAATCGG ACATCATGCT CGCCTCGGCC
TCCTCCGCCG TCCTGATCGG CTTCAACGTC CGTCCCACGG CACGGATCAA GGATATCGCC
GAGCAGGAAA AAGTGGACAT CCGCTTCTAT GACGTCATCT ATCAGATGGT CAACGAAGTA
AAAGACGCCA TGGCCGGCAT GCTGGCCCCG GTGGTCAAGG AGGTCTACCT TGGTCAGGCC
GAAGTCCGGG ACACCTTCAG TGTGCCCAAG GTGGGCACTG TGGCCGGTTG CATGGTCGTG
GACGGCAAAC TCCAACGCAA CGCCCACACA CGGCTGTTGC GCGATGGAGT GGTCATCTAC
ACCGGCAAAA TCGATTCTTT GAAACGCTTC AAAGACGACG CCAAGGAAGT CCAGAAAGGC
TTCGAATGCG GTGTCGGCCT GGAGAATTTC AACGACATCA AATCCGGCGA CATCATCGAG
GCTTTCGAAG AGGTCCAGGA AAAAGCGACC CTGGATTAG
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| Protein sequence | MTTKMRVREL SNELGLSNKE LLHLLRELGI QVKSHMSGLS DDEVDQVRQR FHAGSQSQDS
VQKRTTRSGV IVRRRRRAAK SESEPEPQPA EEPEAEPEAA AEAAAAEPQP EPAPTARIVE
PPHADEEPEE GEPEAEEPEA EEPQHPEETT QAEPAQDTGV AQEPQETEET IQEQPAEDSE
EPSETEAGKK KKKKRKKKPE SPAVKVISKP EVTAEEPAPS PAPAEAADTE AASKKKKKKD
KRVVDFSSTP AEAEPQDKRK ASTQWKKKKS AGVKDKTGGK ERRPGRKRQQ QGGKAEPVRP
TTQPTKASKR KIKIDEAIRL GDLARQLGVK VQELIKSLMQ LGIMATINQS LDIETATVLA
EEFGYEVEKV GFSEDEFILP KEEDNPEALE PRWPVVTIMG HVDHGKTSLL DAIRESKITT
KEAGGITQHI GAYYVGTDRG ELVFLDTPGH EAFTAMRARG AQVTDIVILV VAADDGVMDQ
TREAINHSKA AGVPLIVAVN KMDKENADPE RVKRELAEFD LVPEEWGGDT IYAYVSAKSH
SGLDDLLEMV LLQAEVQELK ANPAKRARGH IVEAKLDKGR GAVGTVLVQE GTLHHGDAFV
CGLYHGKVRA LFNDRGKNIK SAGPSMPVEV QGFDGVPEAG DEFVAVQDDK VARRIAEERQ
TKQREKDLAK ETKVTLESFM AAKADEEVKS LNLVIKADVQ GSLEACIEAV RKLSTDEVKV
EIIHGGTGSI SESDIMLASA SSAVLIGFNV RPTARIKDIA EQEKVDIRFY DVIYQMVNEV
KDAMAGMLAP VVKEVYLGQA EVRDTFSVPK VGTVAGCMVV DGKLQRNAHT RLLRDGVVIY
TGKIDSLKRF KDDAKEVQKG FECGVGLENF NDIKSGDIIE AFEEVQEKAT LD
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