| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0486 |
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| Symbol | |
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| ID | 8418292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 591569 |
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| End bp | 592654 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645037048 |
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| Product | HflK protein |
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| Protein accession | YP_003197361 |
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| Protein GI | 258404619 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.333714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTGGG ATTGGGAAAA ACTCCAAGAG CGACGGCAGA GGCAACAGGG CGGTTCCGGT
GGCGGGCCGC AGATGCCTCA ATTCGATTGG GAAGAGAAAC TACGTAAGTT TAAAAATTTC
AAGGGTTCAG GAATAAAGGT GGGCATATTG CTCGCCCTGT TGCTGTGGGC GACCACCGGG
ATTTATATCG TCGAGCCGGC AGAGGTAGGG GTTGTCCAGC GATTCGGGGC GTTTTCCCGT
ATGACCCAAC CTGGTCCGCA TTACCATCTG CCGTTTCCTA TTGAAACGGT ACAGACTCCA
GCTGTGAGTC AAGTCAACCG CATTGAAATT GGATTTCGCG GTGCGGGTGA GCCCGGCTCC
TATAGTCAAA CGCAATTCAG GCAAATCCCT GAAGAGGCCT TGATGCTGAC CGGGGATGAA
AACATTATCA GCGTTCAGTT TATCGTCCAG TACCAGATCA AAAACGCCAG AAATTATCTC
TTTAATATTG TCGAGCAACA CAAGTCGGTC AAGGACGCCG CTGAAGCAGC GATGCGTGAA
GTTATCGGTC GCAACCGGAT CGATACTGCT CTGACCGAGG GCAAGACCGA GATCCAGAAC
GACACCCGGG GACTGCTTCA GGAGATCCTG GACAGTTATA ACAGCGGTAT CAGTGTCGTG
GCTGTGCAGA TGCAGGATGT CCATCCCCCG GATCAGGTCG TGGATGCCTT TAAGGACGTG
GCCAGTGCTC GGGAAGATAA GACCCGCTTT ATCAACGAAG CTCAGGCCTA TCGCAATGAT
ATTATTCCTC GTACCCGAGG GGATGTCGCT GAAATAACCC GTGAAGCCGA GGCCTTTAAA
GAGTCGAAAA TCCGTCAGGC CAAGGGTGAT TCGGCCCGTT TTCTGAAGTT GCTCGCGGAA
TACAAAAAGG CTGAAGCGAT CACTTCGGAA CGGCTGTACT TGGAAACGAT GGAAAAAGTT
CTGGCGAACC CCAGTACGGA AAAAACCATC ATTTCCAAAG ACGCCATGGA ATCCGTGGTG
CCGTATCTGC CGCTGGAACG ACTGCCGCGT TCCGGCCGCA ACACCCAAGC CGGGGGAGGA
AAATAA
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| Protein sequence | MNWDWEKLQE RRQRQQGGSG GGPQMPQFDW EEKLRKFKNF KGSGIKVGIL LALLLWATTG
IYIVEPAEVG VVQRFGAFSR MTQPGPHYHL PFPIETVQTP AVSQVNRIEI GFRGAGEPGS
YSQTQFRQIP EEALMLTGDE NIISVQFIVQ YQIKNARNYL FNIVEQHKSV KDAAEAAMRE
VIGRNRIDTA LTEGKTEIQN DTRGLLQEIL DSYNSGISVV AVQMQDVHPP DQVVDAFKDV
ASAREDKTRF INEAQAYRND IIPRTRGDVA EITREAEAFK ESKIRQAKGD SARFLKLLAE
YKKAEAITSE RLYLETMEKV LANPSTEKTI ISKDAMESVV PYLPLERLPR SGRNTQAGGG
K
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