| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0482 |
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| Symbol | |
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| ID | 8418288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 586982 |
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| End bp | 588232 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037044 |
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| Product | amidohydrolase |
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| Protein accession | YP_003197357 |
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| Protein GI | 258404615 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.338769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTC TTCTCCGCAA CGCCGTGCTC GGCGAAACCC CTACTGACCT GTTCATCGAC
CGCGGCGTCT TTCAACGCAT CGGCCCAGAT CTGGACATCT CGGCAGACAA AACGATCGAC
GCCGCTGGCA AGGCCATTGT GCCTCCGCTG GTCAACGGCC ACACCCACGC GGCCATGACC
CTGCTCCGCG GCTACGCGGA CGACATGGAA TTGCACACCT GGCTCACGGA ACATATCTGG
CCCCTGGAGG CCCGGCTGAG CGAGGAGGAT GTCTATGTCG GATCACTCCT GGCCTGCCTG
GAGATGATCA AGTCTGGAAC GCTGTTTTTC AATGATATGT ACTGGCATTT CGAGGGCACC
GCCAGGGCGG TGACGGAGAT GGGTCTGCGG GCGGCCCTTT CGTCGGTCTT CATTGATTTC
GGGGATGCCC GGACGGCTGA GGACAAACAG CGACGCTGCC TGGACCTCCT CGCGACCTAC
AAAGAAGTTG ACCCGCGCCT GCAATGCGCT CTCGGCCCCC ACGCCGTGTA CACGGTGAGC
CGGAAATCCT TGGAATGGAT CAGAGATATA GCTGAGGAAC ACGATCTGCT GATCCATATG
CATGTGGCCG AGACCCGCAA AGAGGTCGAG GACTGCATGG CCGAGCACGG CAAACGCCCG
GTCGCCTATC TGGACGAACT CGGCCTGCTT TCCCCGCGTC TTGTCGCTTG CCATGCAGTC
TGGCTCACCC CTGAAGAAAT GGAGCTCCTG GCCAAGCGCG GCGTGAACAT CGTGCACAAT
CCGGTCTCGA ACATGAAGCT CTGCTCCGGA ACCAGTCCCG TGGAATCCAT GCGCCAACAT
GGCCTGCGGA TCGGACTCGG CACGGACGGC TGCTCATCCA ACAACGCCCT GGACATGTTC
AGCGAGATGA AATCCGCGGC GTTGGCAGCC AAAGTGGCGA CCGGATCACC CAAAGCCCTC
CCGGCTGATG CCGTGTGGGA GATGGCCACT GCCCAGGGGG CTGCCATATT CAATCTCAAC
CACGGGATAA CCGAAGGGGC CTGGGCCGAC TGCCTGCTGG TGGACCTCGA TCAACCGGCA
ATGGTGCCCT GCTACAACCT GACCTCCAAT CTGGTCTATG CCGCTTCCGG AGGCTGCGTG
GACACAGCCA TCTGTAACGG CGAAGTTCTG ATGCAAAAGC GCCATATCCC AGGAGAAGAG
GAAATTATCG CCCGGGCCCG GGCCTGTGCC CGGCGTCTTG TTGCTGGGTG A
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| Protein sequence | MSLLLRNAVL GETPTDLFID RGVFQRIGPD LDISADKTID AAGKAIVPPL VNGHTHAAMT
LLRGYADDME LHTWLTEHIW PLEARLSEED VYVGSLLACL EMIKSGTLFF NDMYWHFEGT
ARAVTEMGLR AALSSVFIDF GDARTAEDKQ RRCLDLLATY KEVDPRLQCA LGPHAVYTVS
RKSLEWIRDI AEEHDLLIHM HVAETRKEVE DCMAEHGKRP VAYLDELGLL SPRLVACHAV
WLTPEEMELL AKRGVNIVHN PVSNMKLCSG TSPVESMRQH GLRIGLGTDG CSSNNALDMF
SEMKSAALAA KVATGSPKAL PADAVWEMAT AQGAAIFNLN HGITEGAWAD CLLVDLDQPA
MVPCYNLTSN LVYAASGGCV DTAICNGEVL MQKRHIPGEE EIIARARACA RRLVAG
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