Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0474 |
Symbol | |
ID | 8418280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 579280 |
End bp | 579939 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645037036 |
Product | protein-L-isoaspartate O-methyltransferase |
Protein accession | YP_003197349 |
Protein GI | 258404607 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.462994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAGCC TCGACACAAA TCTCCAGCGG CGTCCAGAGC GCGAAATCAT GGTACAGGAG CAGATCGTTG CCCGGGGGAT ACGTGATTCC AGGGTGCTTG CAGCTCTGCG CGATGTCCCG CGGCACCGTT TTGTCCCCGC GCAGTACCAG GACGCGGCGT ACGACGACGC CCCCTTGCCT ATCGGGGACG GGCAAACCAT TTCTCAGCCG TATATCGTGG CCTATATGAC CGAACTCCTT GAACTCCAGC CGGCAGACCG GGTGCTGGAA GTGGGGACAG GGTCCGGGTA CCAAGCGGCT GTGGCCAGTC GCCTGGCCCA GGAGGTGTAT ACCATCGAGC GGGTGGAAAG CTTTGACGCC CGTGTGCGCG AGGTGTTTCA CGAATTGGGC TATACCAATA TTGTTTGCCG CATTGGTGAT GGAACCAGGG GGTGGCCGGA GGCGGCCCCG TTTGAGGCTA TCCTCGTCAC GGCCGCGGGG CGACGTGTTC CGCAACCCCT TGTCGAGCAA CTTGCTGTGG GAGGGCGCCT TATCATGCCG GTGGAAAACG ATCGCGGCAG GCAGGTGATC GTGCGCATGA CACGGACATC GGAGGAGGAC TACGCACAAG AGCATTTTCT GGCCGTCGCC TTTGTTCCTC TTCTGGGTGC GTTCGCCTGA
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Protein sequence | MVSLDTNLQR RPEREIMVQE QIVARGIRDS RVLAALRDVP RHRFVPAQYQ DAAYDDAPLP IGDGQTISQP YIVAYMTELL ELQPADRVLE VGTGSGYQAA VASRLAQEVY TIERVESFDA RVREVFHELG YTNIVCRIGD GTRGWPEAAP FEAILVTAAG RRVPQPLVEQ LAVGGRLIMP VENDRGRQVI VRMTRTSEED YAQEHFLAVA FVPLLGAFA
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