Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0467 |
Symbol | |
ID | 8418273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 572368 |
End bp | 573060 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645037029 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003197342 |
Protein GI | 258404600 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCT ATACTGTGCT CCTCGTGGAA GACGAGGTGG ATATCCTGAA TCTGTTGCGC ATCAATTTTG AAAACGGCGG TTTTCGAGTT TTGACTGCGG AAAATGGGTT CCAGGCCCTG GATGTTTTGA GCAGCGCACC AGTTGACCTG GTCGTCCTGG ATCTGATGCT GCCCGGCAAG GATGGCTTGG AAGTCTGCCG TGAATTGCGT TCCCGGGAGT CCACGAAACA TTTACCGGTG ATCATGCTCA CAGCCAAAGG CGACGAGGTC GACCGCATCG TTGGACTGGA ACTCGGCGCT GACGACTATG TGGTGAAGCC ATTTAGTCCC CGGGAGCTTT TGCTCCGGGC CAAGGCGGTC ATGCGTCGCG GCAAACCGCA GCCGGAAGAA GAAACCCTAT GGGAGTCGGG AGGGTTGCGC GTCGATTTCG GGACCTACAA AGTGACCGTC GACGGCGAAG ACCGGGAATT GACAGCCACC GAATTTCGGC TTTTGGTCCA TCTCATCCGC AGTCGGGGCA AGGTCCAGAC CCGTGATCAA TTGTTGAACA AGGTTTGGGG GTATGAATTC GAAGGCTATG CCCGAACCGT GGATACCCAT GTCCGCCGCT TGCGGCACAA GATTGAACCG TATGCTGCCA TTGTCGAGAC CGTCCGCGGG GTGGGCTACC GCCTCCACGG TCAGGAGGAG TGA
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Protein sequence | MTTYTVLLVE DEVDILNLLR INFENGGFRV LTAENGFQAL DVLSSAPVDL VVLDLMLPGK DGLEVCRELR SRESTKHLPV IMLTAKGDEV DRIVGLELGA DDYVVKPFSP RELLLRAKAV MRRGKPQPEE ETLWESGGLR VDFGTYKVTV DGEDRELTAT EFRLLVHLIR SRGKVQTRDQ LLNKVWGYEF EGYARTVDTH VRRLRHKIEP YAAIVETVRG VGYRLHGQEE
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