| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0448 |
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| Symbol | |
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| ID | 8418253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 549478 |
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| End bp | 550140 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037009 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_003197323 |
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| Protein GI | 258404581 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATTC CCGTGGTACG CGATATCCTG GAACAAAACG ACCAAGTGGC GGAAGAACTC
AAATCGCTGT TTGCCGAAAA AAATATCCTG GTCTTGAACC TGATGAGTTC GCCGGGGGCA
GGGAAAACGA CCCTGCTGGA ACACACCCTC CACGCCTTGA AGGAGGAATT CGGCATCGGG
GTCATTGAGG GCGACCTCCA GACCTCGAAC GACGCCGAGC GCGTCGCGGC CACTGGGGCC
CAGACCATCC AGATCAACAC CGACGGCGGC TGCCATCTGA GCAGCAACAT GGTCAAAAAG
GCCGTGGAGC AATTGGATCT GGACCGGCTG GACATCCTGT TCATCGAAAA CGTCGGCAAC
CTTGTCTGCC CGGCTGAATT CAACCTCGGC GAGGATCTCA AGGTCACCTT GCTCAGTGTC
ACCGAGGGCG ACGACAAGCC CGAAAAATAC CCCTACATGT TCGCTCTGTC CAAGGTCGTG
CTCCTGAATA AGGTCGATCT TCTGCCCTAC GTCGATTTCA GCCTGGAACG CGCTGAGCAC
TTCGCCCGGG CGGTCAACAA GGAGACCCAG GTCTTCTCCC TTTCCTGCCG CGAGGGCGAC
GGGCTCGACG AGTGGTACGA ATGGCTCCGC GGCGCGGCCA AAGACAAGCG CACCCACTCC
TGA
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| Protein sequence | MQIPVVRDIL EQNDQVAEEL KSLFAEKNIL VLNLMSSPGA GKTTLLEHTL HALKEEFGIG
VIEGDLQTSN DAERVAATGA QTIQINTDGG CHLSSNMVKK AVEQLDLDRL DILFIENVGN
LVCPAEFNLG EDLKVTLLSV TEGDDKPEKY PYMFALSKVV LLNKVDLLPY VDFSLERAEH
FARAVNKETQ VFSLSCREGD GLDEWYEWLR GAAKDKRTHS
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