Gene Dret_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0426 
Symbol 
ID8418231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp523786 
End bp525432 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content61% 
IMG OID645036987 
ProductNAD+ synthetase 
Protein accessionYP_003197301 
Protein GI258404559 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0171] NAD synthase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.277898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.272376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGG CCCTTGTCCA AAATAATCCC ATTATCGGTG ATATCCACGG CAATATGCAG 
GCGCTGGTGC GAGCTGGCGA GCGGGCCTTT GCCCAGGGCG CCCGGTTGGC CCTCGCCCCG
GAATTGGCAC TCACCGGCTA CCCCCCCCGG GATCTGCTCC TCAATGAAGC GGTTCTCCAA
TCCGCGTGGC GCGCTGTGGA GGAATTGGCC GCACGATTGC CGACGGGATT GGCCTTTGTC
CTCGGAACGC CACTGCGCAC GGACAACGCG CCCGAACTGC CTGAAGGAGG CGTCTATAAC
GGCGCGGTCT TGCTCGAGGG AGGAGCGGTG CGTCAGGTCT TCGCCAAGAC CCTTTTGCCG
ACCTATGACG TCTTTGACGA GACCCGGTAT TTCAGTCCCG GGCCAGGCCC AGGTGTATTT
GAACTTGATG GGTGGCGCTT CGGGGTGACC ATTTGTGAAG ATGCTTGGAA TGATAAAGAT
TTCTGGAAAA AACACCGCTA TCCTGCGGAC CCGGTCGAGG AACTCGCCAC GCAGGGTATC
GATGGATTGA TCAACCTTTC CGCCTCTCCC TTTTCCTTGG GCAAGCACCG CGTCCGGGAG
GAGATGTTCG CCTCTCTGGC ACACAAGTAT GCAGTGCCGT TGTATTTTGC CAATCAGGTC
GGCGGCAATG ACGATCTTGT CTTTCCCGGT CGCAGTCTGG CCCTGGATGC CTCAGGGCAG
GTCATCGGCC GCGGGCGGGG GTTTGTCGAG GACCTGGTCA TCGTGGAACA AACCCCCGGT
TCAGGACCGC TTCCAGCCGA CGACTTCGAG CGCCCCGCCG AGGCCTGGGC CGCGGTAGTT
CTGGGGACGC GGGACTATGT CCGCAAATCC GGCTTTTCCA AAGCCCTTTT GGGCCTCTCC
GGCGGGGTGG ATTCGGCCCT GTGCGCGGCT GTAGCCGTGG AGGCCCTGGG TGCCGAAAAT
GTCCTGGGCG TGCTCATGCC GTCTCCCTAC ACCAGCGCCG CCAGCATTGA AGACGCCCAG
GCCCTGGCCG ACACCTTGGG CATTGCCCAG CAGGTCCTGC CTATCGAACC GGTGATGAAC
GCCTTTGAAG AGACCCTGCG TCCGGCCTTT ACCGGCTATA CCCCGGACGT GACTGAAGAG
AATATCCAGT CGCGAATCCG CGGCAATCTC CTGATGGCCT TGTCCAATAA ATATGGATCC
CTGCTGCTGA CCACGGGCAA TAAATCCGAA TTGGCCGTGG GCTATTGCAC GATCTACGGC
GATATGGCTG GGGCGCTGGG CGTGATTGCG GATATGCCCA AAACCCTGGT CTATGAGGTT
TGTCGTTGGC TCAACAGGGA GCGCGGTGAG GTCGTTCCCC AGCGGATTCT GGACAAAGCC
CCTTCGGCTG AATTGCGCCC GGACCAGAAA GATTCGGACA GCTTGCCCGA TTATGCGACC
CTGGACGGGC TGCTGGGGCT GTTGGTGGAC CGGCATTATT CGGTGGAGCA ATGTGTGGAG
GCGGGATATG ACGCGGGTAT GGCCCGCGAG GTGCAGCGTT TGGTTCGCCG GGCCGAATTC
AAGCGCCGGC AGGCTCCGCC CGGCATCAAA ATCACCGATC GTGCCTTTGG CACCGGGTGG
CGGATGCCGT TGGCGGCGCG CTGGTAA
 
Protein sequence
MRLALVQNNP IIGDIHGNMQ ALVRAGERAF AQGARLALAP ELALTGYPPR DLLLNEAVLQ 
SAWRAVEELA ARLPTGLAFV LGTPLRTDNA PELPEGGVYN GAVLLEGGAV RQVFAKTLLP
TYDVFDETRY FSPGPGPGVF ELDGWRFGVT ICEDAWNDKD FWKKHRYPAD PVEELATQGI
DGLINLSASP FSLGKHRVRE EMFASLAHKY AVPLYFANQV GGNDDLVFPG RSLALDASGQ
VIGRGRGFVE DLVIVEQTPG SGPLPADDFE RPAEAWAAVV LGTRDYVRKS GFSKALLGLS
GGVDSALCAA VAVEALGAEN VLGVLMPSPY TSAASIEDAQ ALADTLGIAQ QVLPIEPVMN
AFEETLRPAF TGYTPDVTEE NIQSRIRGNL LMALSNKYGS LLLTTGNKSE LAVGYCTIYG
DMAGALGVIA DMPKTLVYEV CRWLNRERGE VVPQRILDKA PSAELRPDQK DSDSLPDYAT
LDGLLGLLVD RHYSVEQCVE AGYDAGMARE VQRLVRRAEF KRRQAPPGIK ITDRAFGTGW
RMPLAARW