| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0416 |
|---|
| Symbol | |
|---|
| ID | 8418221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 508826 |
|---|
| End bp | 509734 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645036977 |
|---|
| Product | protein of unknown function DUF224 cysteine-rich region domain protein |
|---|
| Protein accession | YP_003197291 |
|---|
| Protein GI | 258404549 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2048] Heterodisulfide reductase, subunit B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.373291 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTACG CCTACTACCC CGGATGCTCC CTGACCGCCA CGGCCAAGGA ATACGACACG
TCGACCCGAG CCCTGTGCGC CCGTCTCGGG ATCACGCTGG AGGAGATCCC GGACTGGACC
TGTTGCGGTG CCAGCGCGGT TGAGCCGGTC AGCCAATTGC TGACCCATGT CCTGCCGGCC
CGCAATCTGG CCCTGGCCGA AGGCCTGGAC GAAAACGAGG GGGTCCTCAT CCCGTGCAGC
GCCTGCTACC TGAACCATCT GCGGGTGGAA ATGGAAGACG CTCCTGTCCC GGAACGCAAA
CGGCGGGTGA ACACGGTCCT GGCTGAAGAA GACCTGGTCT ACGACGGAGA CCACCCGGTC
GTCGTTCACC TGCTGGAAGT TCTGGGACGC CCAGAGATCC TGGAGACGTT GACGACCGAG
ACGACGTCGC CCCTCAACGG CCTGCGGATC GCCCCGTACT ACGGTTGCCA GATCCTGCGC
CCCTTCGCCC GCTTCGACGA CCCGGAAATT CCCACGAGCA TGGAGCCGAT CCTCCGGGCC
GTGGGAGCGG AGATCCATCC CTGGCGCCTG GGCAATGCCT GCTGCGGGGC CTCACTGATG
ACCACGCACA AGGAGGTCGC CCTGCACAAT GTCGGACGCA TCCTCCACAG CGCCCAGGGC
GCCGACGCCG TGGTCACCGT CTGTCCCATG TGCCAGCTCA ATCTGGAGGG ATTTCAAAAA
AACGCCCTGC ACCGCTTTCC CGACGACGAG CCGCTACCGA TTCTCTATCT GCCGCAATTG
ATCGGACTGG CGCTCGGCCT GACTCCTGGG GAGGTGCAGT TGAACAAGAA TCTCCACGCC
GGAGAGTTTG TCCACGGATT GGCGGGCCTG GTTCCGGAAA AGCAGCCGGA GGCGGACGCC
GTCTCCTGA
|
|---|
| Protein sequence | MRYAYYPGCS LTATAKEYDT STRALCARLG ITLEEIPDWT CCGASAVEPV SQLLTHVLPA
RNLALAEGLD ENEGVLIPCS ACYLNHLRVE MEDAPVPERK RRVNTVLAEE DLVYDGDHPV
VVHLLEVLGR PEILETLTTE TTSPLNGLRI APYYGCQILR PFARFDDPEI PTSMEPILRA
VGAEIHPWRL GNACCGASLM TTHKEVALHN VGRILHSAQG ADAVVTVCPM CQLNLEGFQK
NALHRFPDDE PLPILYLPQL IGLALGLTPG EVQLNKNLHA GEFVHGLAGL VPEKQPEADA
VS
|
|---|
| |