| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0324 |
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| Symbol | |
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| ID | 8418128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 403985 |
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| End bp | 406393 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645036889 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_003197204 |
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| Protein GI | 258404462 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAGAG AACTTGAAGT CGAGGATAGA CGGCGTATGA ACCGTTTTCT GAAAATAGCC
TTGATTGGTG TGATCATCTG CCTGTTTCTG GGTGCCGGCG GAGCGGCCGG GGTCTATTAC
TGGGCGGCCA AAGATCTGCC CGGGTTCAAG AAGATCACCG ATTACAACCC GCCCCTGGTG
ACCACCGTCT ACAGCGCGAA CAAGGAGGTC CTGGGGTATT TCTCCAAGGA GCGGCGGTTT
CTGGTGCCTT TGAGCCGGAT GGCGCCGGTG ATCAAAAAGG CCTTTCTGGC TGCTGAAGAT
GCGGAATTTT ATTCCCACGA AGGCGTCGAT CTGTGGGGAA TCATGCGTGC GGCCTGGAAA
AACTTTCAGG CCGGCGAGAT CGTCCAGGGC GGCTCAACCA TCACCCAGCA GGTCATCAAG
TCCATGCTCC TGTCCTCGGA GCGCAGCTAC CAGCGCAAGC TCAAAGAAGC GATCCTGGCC
TACCGCCTGG AGAAAAACCT GGACAAGGAC GAGATCCTGA CCATCTATCT CAATGAGATC
TATCTTGGGG CCGGAGCTTA CGGAGTTGAA GCCGCAGCAC GAATGTATTT CGGGAAACAC
GCTGAAGCCT TGACGCTGCC GGAGGCGGCG CTTCTGGCCG GACTGCCCAA AGCCCCCTCG
GCCTACAATC CGTTACGCCA TCCCGAGGCC GCCCGGGAGC GCCAAGTCTA TGTCCTGAGC
CGTATGCTCG AACAGGGGTG GATTTCCCAG GACGAGTACG AAGAGGCCAA AGCGGCGGAG
CTGGAATACT CGAGCATGGC CGATCCCTCC TGGAAGGTCG GGTCGTACTA TCTAGAAGAA
GTTCGGCGCT GGCTGATCGA TCGGTTTGGG GAAGAGACGG TCTATACCGG CGGCCTCAAT
GTCTATACTG CCGTAGACCT CAAACACCAG CGGGCCGCAG AACAGGCCGT TCGGGAAGGA
TTGCGGGCCT CGAGCAAGCG CCGCGGCTGG AAAGGGCCGG TTCGTAGCGT CAATGCCACT
GCCGTGGACG ATTTTCTCGA GCAGCAGGAA TTGCCTGAGC AGGAAGCGCT GCGGGACGGG
ACCTGGGTGC AGGCCGTGGT CACCAGCGTC GATAAGCAGG CCGCAGCGGT GCGCTTCGGC
AATCATACCG GGCGTGTTGC AGTGGAGACC ATGGGCTGGG CCCGGACGCC CAATCCGGAA
AAGGCGCCCG AGGAGGTGCC GCAGGTCAAG GACGCGCGCA AAGTCCTTGA GACCGGCGAC
GTGGTCTGGA CTTCGGTGGT CGAGATCCCG GAAGGGACGC AACAGCCGTG GTCCCTGGCC
TTGGAGCAGC AGCCCGAGGT GCAGGGGGCT TTGGTTTCCC TCGAGCCAGG CACCGGCTTT
GTTAAAGCCC TGGTCGGGGG GTATTCGTTT GACGAAAGCC AGTTCAACCG GGCCACGCAG
GCCCAGCGGC AGCCCGGTTC CGCATTCAAG CCCATCGTGT ATTCGGCGGC CCTGGACAGC
GGGCTGACTC CGGCCACAGT TCTCCTGGAC GCCCCCATCG TCTATAACGA TCAATCCACC
AATTCGACCT GGAAACCGGA AAATTTCGAA GGGGTCTTCT ACGGACCGAC CCTCCTGCGC
ACCGCGCTGG TCAAATCCCG CAATCTGGTG ACCATCCGTG TGGCCCAGAA AATCGGCATC
GATACCATTA TCCAACGAGC CAAGACCTTG GGGCTCAAGG CCGAATTTCC CAGAGACCTC
TCAGTCAGTC TCGGATCGGC TGCAGTCTCG CCGCTGAATT TATGCCAAGC CTATACGGCA
TTCGCCCGCA AGGATGGGGC GTATGTCGAG CCGCGATTTG TTCTGCGCGT CGAGGACGCC
TGGGGTGAGG AGCTTTTTGT TTCCGAACCG GTGCAAAACG AGGCCATCAG CCCTCAGACC
TCCTATATCA TCAAACATTT GCTGCAACAG GTCGTCCAGA GCGGCACGGC CTGGCGGGTC
CGGGCCTTGG GACGCCCGGT GGCCGGAAAG ACCGGGACCA CCAACGACCA GCGCGACGCT
TGGTTCATGG GCTTTTCCCC CGAGCTTCTC ACCGGCGTGT ACGTCGGTTT CGACCACCTC
GACCCGATGG GCAAATACGA AACCGGCTCC CGCGCCGCCT CGCCGATCTG GCTGTCCTAC
CGTCAGGCGG TCAAAGGCGA CGTCCCGGTT CAGGATTTCC CACGCCCAGC AGGGATCGTC
ATGGCCCGTA TCGATGCGGA TACCGGCAAA CTGGCGGGGC CGGATACCGA GCAGAGCTAT
TTCCTGCCGT TTAAAAGCGG GACCCAGCCC ATGGAGGTCA GTCCGCCGTT GAAACAGGAC
AGCCCGGAGT CCGGCGGCAG CTCCGGTGGT GAGACTGGGG GGGATGATCT CTTGAAGGAG
GTCTTTTGA
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| Protein sequence | MHRELEVEDR RRMNRFLKIA LIGVIICLFL GAGGAAGVYY WAAKDLPGFK KITDYNPPLV
TTVYSANKEV LGYFSKERRF LVPLSRMAPV IKKAFLAAED AEFYSHEGVD LWGIMRAAWK
NFQAGEIVQG GSTITQQVIK SMLLSSERSY QRKLKEAILA YRLEKNLDKD EILTIYLNEI
YLGAGAYGVE AAARMYFGKH AEALTLPEAA LLAGLPKAPS AYNPLRHPEA ARERQVYVLS
RMLEQGWISQ DEYEEAKAAE LEYSSMADPS WKVGSYYLEE VRRWLIDRFG EETVYTGGLN
VYTAVDLKHQ RAAEQAVREG LRASSKRRGW KGPVRSVNAT AVDDFLEQQE LPEQEALRDG
TWVQAVVTSV DKQAAAVRFG NHTGRVAVET MGWARTPNPE KAPEEVPQVK DARKVLETGD
VVWTSVVEIP EGTQQPWSLA LEQQPEVQGA LVSLEPGTGF VKALVGGYSF DESQFNRATQ
AQRQPGSAFK PIVYSAALDS GLTPATVLLD APIVYNDQST NSTWKPENFE GVFYGPTLLR
TALVKSRNLV TIRVAQKIGI DTIIQRAKTL GLKAEFPRDL SVSLGSAAVS PLNLCQAYTA
FARKDGAYVE PRFVLRVEDA WGEELFVSEP VQNEAISPQT SYIIKHLLQQ VVQSGTAWRV
RALGRPVAGK TGTTNDQRDA WFMGFSPELL TGVYVGFDHL DPMGKYETGS RAASPIWLSY
RQAVKGDVPV QDFPRPAGIV MARIDADTGK LAGPDTEQSY FLPFKSGTQP MEVSPPLKQD
SPESGGSSGG ETGGDDLLKE VF
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