Gene Dret_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0312 
Symbol 
ID8418116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp386177 
End bp387031 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content60% 
IMG OID645036877 
Productferredoxin-NADP(+) reductase subunit alpha 
Protein accessionYP_003197192 
Protein GI258404450 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTC CCATTCTTCA TAAACGGAAG CTCATTCCCG GCCGGGTCAG CGAGCTGGTG 
CTCGAAGCCC CTCAGATCGC TGCCAAGGCC GAGCCGGGTA ATTTTATTAT TCTGCGGCTG
GCGGACGACG GGGAGCGTAT CCCGTTGACC ATCGCGGACA CGGATGCGGC GAAGGGAACG
ATCACTCTGG TGTACCTGGT GGTTGGCAAG TCCACGGCCC ACTTGGAGAC ATTTGAGGCC
GGCGACACCA TCCTGGATGT CTGCGGCCCA CTGGGGCGAC CGACCCACAT CGAGCCAGTG
GGAACGGTCC TGTGCGTCGG CGGCGGCACT GGCATCGCTG CCATGCACCA CATCGCCAAA
GGGCACCAGT TGGCCGGCAA CCATGTCGTT TCTGTTATCG GTGCCCGGAG TGAAGATCTG
CTGCTTTTCG AGAAAGAGCT CACGGCCATC AGCGCAGAGG TGCTCGTGGC CACGGACGAC
GGGTCTCGCG GCCATAAAGG ATTGGTCACC GAAGTTCTGG AACAGCGTAT CCAGCAGGGG
ATCGAAGCCG GGGAGTCCAT CGGTGAGATT GTGGCCGTCG GGCCAGTGCC CATGATGCGT
GCCGTTGCGG AATTGACCCG GCCTTACGGG ATCAAGACCA CCGTGAGCCT GAATTCGATC
ATGGTCGACG GGATCGGTAT GTGCGGCTCC TGCCGGGTCA CCGTGGGAGA CGCGGTGCGC
TTCGCCTGTG TTGACGGCCC GGAATTCGAC GCCCATCAGG TTGATTTCGA GGAAATGATG
CGGCGGCAAT GCACTTTCTC CGAGCAGGAA AAACTCTCCT ACGACCATTT TTGCCGGAAA
TGCCATCATG ACTAA
 
Protein sequence
MAVPILHKRK LIPGRVSELV LEAPQIAAKA EPGNFIILRL ADDGERIPLT IADTDAAKGT 
ITLVYLVVGK STAHLETFEA GDTILDVCGP LGRPTHIEPV GTVLCVGGGT GIAAMHHIAK
GHQLAGNHVV SVIGARSEDL LLFEKELTAI SAEVLVATDD GSRGHKGLVT EVLEQRIQQG
IEAGESIGEI VAVGPVPMMR AVAELTRPYG IKTTVSLNSI MVDGIGMCGS CRVTVGDAVR
FACVDGPEFD AHQVDFEEMM RRQCTFSEQE KLSYDHFCRK CHHD