| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0309 |
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| Symbol | |
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| ID | 8418113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 380952 |
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| End bp | 382001 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645036874 |
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| Product | hypothetical protein |
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| Protein accession | YP_003197189 |
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| Protein GI | 258404447 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCACG AACACTACGA CGGTCTAACC CTTTTTTCTG GTGGCCTGGA CTCGATCCTG
GCCACCAAGG TTCTGCAGGC TCAAGGGCTG CGTGTCCTTG GCGTTCATTT TGTGACCCCG
TTTTTCGGGG CCCCGGACCG ACTGGCCCAT TGGCAGCGGA CCTACGATAT CCCCCTGCAG
GCCATTGACG CCGGGCAGGC CTTTGTGGAC ATGCTTTTGG CTGGACCGGA GAGCGGATTC
GGCAAGGTCC TCAACCCTTG CGTGGACTGC AAAATCCTGC TTTTGCAACT GGCCAAGCAG
CATATGGCCG CTTACTCCGC CCGCTTTCTG GCCACCGGGG AAGTCCTGGG CCAGCGCCCC
ATGTCCCAGC GTTCGGACAC CTTGCAGGCC ATCCGGAAAA AGGCCGACGT TGAAGATATC
CTGGTCCGCC CCTTGAGCGC TCAACTCCTG CCGCCGTCGG CAGTGGAACA GCAGGGGATC
GTCAACCGCG AACACTTGTT GTCTGTCCGG GGACGGGGAC GCAAGGAGCA GCTCCGCTTG
GCCGAGCAGT TCGGGATCAC GGAGATTCCC CAACCCGCCG GGGGCTGCCT GTTGACTGAA
CCGGAGTCAG CCAAACGGTA CTGGCCCCTG CTCAAACGTG GGCACACCCC GCCGGCCTCG
GACTTTCACT TGGCCAACCT CGGCCGCCAG TTCTGGGCTG ACGCACGGTG GCTGTGTGTC
GGGCGCAACC AGAGCGACAA CATCCTCCTG GCCGAGACCG CCGCAGTCGA TGACTTTGTT
TTCAAACTCA AAGACCTGCC CGGCCCCCTC GCCCTCGCCC GCCCGTTGCC CGGCGCCCAA
TGGGACGAGA CTGCCATCCG GTCGGCAGCG GCCTTGACCG CCTCGTTTTC CAGCAAGGCC
CGCCAGCACA AAGAGGACAT CCTCATGCTG GTCTCCCATC AGGGCCACAC CCGGGAACTC
GCGATCTCCC TGGACTGGGC GCAGGACCTT CCCTGGCGCG AACCGGACTG GGACGATGTC
GACAAATCAC GCCTGCCAGG CGGCTGGTAG
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| Protein sequence | MAHEHYDGLT LFSGGLDSIL ATKVLQAQGL RVLGVHFVTP FFGAPDRLAH WQRTYDIPLQ
AIDAGQAFVD MLLAGPESGF GKVLNPCVDC KILLLQLAKQ HMAAYSARFL ATGEVLGQRP
MSQRSDTLQA IRKKADVEDI LVRPLSAQLL PPSAVEQQGI VNREHLLSVR GRGRKEQLRL
AEQFGITEIP QPAGGCLLTE PESAKRYWPL LKRGHTPPAS DFHLANLGRQ FWADARWLCV
GRNQSDNILL AETAAVDDFV FKLKDLPGPL ALARPLPGAQ WDETAIRSAA ALTASFSSKA
RQHKEDILML VSHQGHTREL AISLDWAQDL PWREPDWDDV DKSRLPGGW
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