Gene Dret_0303 details

Gene Information

• Locus tag: Dret_0303
• Symbol: dnaK
• ID: 8418107
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfohalobium retbaense DSM 5692
• Kingdom: Bacteria
• Replicon accession: NC_013223
• Strand: -
• Start bp: 374128
• End bp: 376041
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 645036868
• Product: molecular chaperone DnaK
• Protein accession: YP_003197183
• Protein GI: 258404441
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGCAAAA TCATCGGCAT AGACCTGGGG ACAACCAACA GTTGTGTCTA CGTCATGGAA 
GGCAAGGAAG CGAAGTGCGT GAACAATCCC GAAGGCGGGC GCACGACCCC TTCCATTATC 
GCCTTTACGG ATAAAGAACG CTTGGTCGGC GATATCGCCA AACGCCAGTC GGTCACCAAC 
CCGGAACGCA CGGTTCACGG GGTCAAGCGA CTGATGGGCC GCGATTACGA CGACCCCCAA 
ATCAAGGAAT GGCGGGAAAA GAGCCCCTAC AAGATCGTCG CGGGCTCCAA AAACGACGCC 
TATGTCGAGG TGGAGGATAA AAAGTACAGT CCTCCGGAAA TCTCGGCCAT GCTCCTACAA 
AAGTTGAAAA CCGACGCTGA GGCCTATCTC GGCGAAACGG TCACTGATGC AGTCATCACC 
GTGCCGGCCT ATTTCAATGA CAGCCAACGG CAGGCCACCC GTGACGCCGG GCGTATCGCC 
GGTTTGGAAG TCAAGCGGAT CATCAACGAA CCGACCGCTG CTTCCTTGGC TTACGGCCTG 
GACAAGAAAA CGAACGAAAA GATCGCTGTC TTTGACCTTG GCGGCGGAAC CTTTGATATC 
TCCATCCTCG AAGTCGGGGA CAACGTCGTT GAAGTCCGCT CCACCCACGG CGATACCTTC 
CTCGGGGGCG AGGACTTCGA CCAGCGGATC GTGAACCACC TGGTCGACGA ATTCAAAAAG 
GAAAACGGCA TCGATCTTTC CGCTGACCGC ATGGCCCTGC AACGGCTGCG CGAGGCTGCG 
GAAAAGGCCA AGAAAGAACT CTCCACCTCC ATGGAGGCGG AGATCAATCT GCCGTTTATC 
ACCGCCGACC AGACCGGCCC CAAGCACATG AACATGAAGC TTTCCCGGGC CAAACTCGAG 
GCCCTGGTCG AAGATCTGGT CGAGCGGACC ATGGCGCCGT GCAAGACCGC CTTGCAGGAC 
GCCGAACTCA AGGCCGGAGA GATCGACGAG GTCATTCTCG TCGGCGGCAT GACCCGCATG 
CCCCTGGTCC AGAAAAAGGT GCAGGAATTC TTTGGTAAGG AACCGCACCG CGGCGTGAAC 
CCCGATGAGG TCGTGGCCAT GGGGGCGGCC ATCCAGGGCG GCATCCTGGG CGGCGACGTC 
AAGGACGTGC TCCTGCTCGA CGTGACCCCG CTCTCCCTGG GCATCGAAAC CATGGGCGGC 
GTGTCCACCA AGCTCATCGA GAAGAACACG ACCATCCCGG CCCGCAAGAG CCAGGTCTTT 
ACCACTGCCG CGGACAATCA GCCCTCGGTG TCCATCCATG TCCTGCAGGG TGAACGCCCG 
ATGGCTCAGG ACAACAAGAG CCTGGGACGC TTCGAGTTGA CCGGTATCCC GGCCGCGCCG 
CGCGGCGTGC CACAAATCGA GGTCACCTTC GACATTGACG CCAACGGCAT GGTCAATGTT 
TCGGCCAAGG ACCTCGGCAC CGGCAAGGAA CAGTCCATCA GCATTCAGCC CTCCAGCGGT 
CTCTCGGAAG ACGAGATCGA CAAGATGGTC AAGGAAGCTG AATCCCACGC TGAAGAGGAC 
GAAAAGAAGC GTAAGCTCAT CGAGGCCCGC AATCAGGCCG ACAACCTGAT CTACACCACG 
GAGAAATCCT TGCGCGACCT CGGTGACAAG GTCGAGGACG ACGTCAAGGC CGATATCGAA 
CAAAAGATCG AGGCCCTGAA AAAGACAATG GAAGGTGAGG ACGAAGAGGC GATCAAGAAA 
GCCACTGACG AACTCTCCCA GGCCTCCCAT CAACTGGCCC AGAAGCTCTA CGAACAGCAG 
CAAGGTGGCC AGGCCGCGGG CGACGCCGGC GGTGAACAGG CCCAGCAGGA CGCCTCCAGC 
GGCGGACAAG ACGATGAAGA CGTCGTCGAC GCCGACTACA CTGAAGTCAA ATAA 

 

Protein sequence

MGKIIGIDLG TTNSCVYVME GKEAKCVNNP EGGRTTPSII AFTDKERLVG DIAKRQSVTN 
PERTVHGVKR LMGRDYDDPQ IKEWREKSPY KIVAGSKNDA YVEVEDKKYS PPEISAMLLQ 
KLKTDAEAYL GETVTDAVIT VPAYFNDSQR QATRDAGRIA GLEVKRIINE PTAASLAYGL 
DKKTNEKIAV FDLGGGTFDI SILEVGDNVV EVRSTHGDTF LGGEDFDQRI VNHLVDEFKK 
ENGIDLSADR MALQRLREAA EKAKKELSTS MEAEINLPFI TADQTGPKHM NMKLSRAKLE 
ALVEDLVERT MAPCKTALQD AELKAGEIDE VILVGGMTRM PLVQKKVQEF FGKEPHRGVN 
PDEVVAMGAA IQGGILGGDV KDVLLLDVTP LSLGIETMGG VSTKLIEKNT TIPARKSQVF 
TTAADNQPSV SIHVLQGERP MAQDNKSLGR FELTGIPAAP RGVPQIEVTF DIDANGMVNV 
SAKDLGTGKE QSISIQPSSG LSEDEIDKMV KEAESHAEED EKKRKLIEAR NQADNLIYTT 
EKSLRDLGDK VEDDVKADIE QKIEALKKTM EGEDEEAIKK ATDELSQASH QLAQKLYEQQ 
QGGQAAGDAG GEQAQQDASS GGQDDEDVVD ADYTEVK