Gene Dret_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0269 
Symbol 
ID8418073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp331286 
End bp332707 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content61% 
IMG OID645036834 
Productmannose-1-phosphate guanylyltransferase/mannose- 6-phosphate isomerase 
Protein accessionYP_003197149 
Protein GI258404407 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0769979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCC CTTCGCCTGA TTCCATATCC GCTTTTGCCG ATTGCCGGGC CCTTATTCTT 
GCCGGCGGAT CCGGGACGCG ACTGTGGCCG CTTTCCAGGA CCCTCCTGCC CAAGCAACTG
CTTCCCCTCA ACGGTGGCGA GTCCTTGCTC CAGCAGACTG TCCGGCGCAC CCTCGGGGTC
CTGCCCCCGG AGCATGTCTG GGTGGTCACC AACGAAGAGC ATGTCTTTGA AGTCCGCAAT
CAATTGCGGA CCCTGGATCC CCTTCTGGAT CGCCAGGTCC TCAGCGAACC CCAGGGACGC
AATACCCTGC CTGCGATTTT GCTGGGGCTG GAGCCCATCG TGCGGGACAC CCCGGGGGCG
ATTGTCGGGG TCTTTCCCTC GGATCATATG ATCGGAGATC AGGACGGCTG GGAGGCCGCG
TTCGGACGAG CCCAGGGACT GGCCCGGGAC GGTTGGTTCG TCACGTTTGG CATCGAACCG
AATACCCCGG AAACCGGCTA CGGCTATATC GCCCGGGACC GTGCCCTTTC GGACGGGTGT
TATGCGGTGG ATCGATTTGT GGAAAAACCG GACGTGGCTA CGGCCCGGGA ATTCGTGGAC
AGCGGCCGCT ATTATTGGAA TAGCGGCATG TTCGTTTTCG GTGTCCAGCC GTTTCTCGAA
GCGGTCCAGG AATACCAGCC CACGCTATGG CAGTGGTGGA CAGGGCGCGA TGAGCGTTCG
CTGACTGCTG GGTACGCGTC CCTGCCGGAT GTTTCCGTGG ATTACGGCAT CATGGAGAAG
GTCGGAAATC AGGCCGTGGT CCAGGCCGAT TTTGACTGGG ACGATCTCGG CAGTTGGGAG
GCCCTGTACC GCCTCGGCGA GCAGGACAGT TCCGGGTGCG TCGTCCAGGG GGATGTCTCC
GCGCTGGATT GCCGGGACAG TATGCTCTAC TCCCAGGGCG GCAAGCTGGC GGCCATCGGC
CTGGAGGACA TGATCGTGGT TCAGACCCGG GACGCCACCC TGGTCTGCTC CATGGACGCG
GTCCAAAAGG TCAAAAATGT GGTCCAGGAT CTCAAGGCGG AAGGCAGTTC CCTGGTTGAA
GCCCACGTGA CCGTCTACCG GCCATGGGGC AGCTATACGG TGCTTGAGGA AAGTCCGTTC
TACAAAATCA AGCGGATCAC GGTGAATCCG GGGGCGACAC TCAGTCTGCA GATGCACCAC
CACCGCAGCG AGCACTGGGT GGTGGTCTCG GGCACGGCCG AGGTCCATGT CGGTGGAGAG
GACAAGCTGT TGACGGAAAA TCAATCCGTG GACATCCCCA AGACAGCAGT CCACCGCTTG
GCCAATCCAG GCAAGGTCCC GGTGGAAATC ATTGAAATCC AAAACGGGCC CTATCTGGAA
GAAGACGACA TCGTGCGCCT GGAGGATGTC TACGGCCGGT AA
 
Protein sequence
MDTPSPDSIS AFADCRALIL AGGSGTRLWP LSRTLLPKQL LPLNGGESLL QQTVRRTLGV 
LPPEHVWVVT NEEHVFEVRN QLRTLDPLLD RQVLSEPQGR NTLPAILLGL EPIVRDTPGA
IVGVFPSDHM IGDQDGWEAA FGRAQGLARD GWFVTFGIEP NTPETGYGYI ARDRALSDGC
YAVDRFVEKP DVATAREFVD SGRYYWNSGM FVFGVQPFLE AVQEYQPTLW QWWTGRDERS
LTAGYASLPD VSVDYGIMEK VGNQAVVQAD FDWDDLGSWE ALYRLGEQDS SGCVVQGDVS
ALDCRDSMLY SQGGKLAAIG LEDMIVVQTR DATLVCSMDA VQKVKNVVQD LKAEGSSLVE
AHVTVYRPWG SYTVLEESPF YKIKRITVNP GATLSLQMHH HRSEHWVVVS GTAEVHVGGE
DKLLTENQSV DIPKTAVHRL ANPGKVPVEI IEIQNGPYLE EDDIVRLEDV YGR