| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0251 |
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| Symbol | |
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| ID | 8418055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 312574 |
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| End bp | 315234 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036816 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_003197131 |
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| Protein GI | 258404389 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAG CACATCTCTC CAAGGGCTAT GAACCCAAGG ACGTTGAAGA CCGGTGGTTG
GACCACTGGC GCGAGAACCA GACATTTTCT CCGGACGCCG AACTGGAGGA CGGACAACCT
CCCTACAGCA TCGTTATTCC GCCGCCCAAC GTCACCGGCA CGCTGCATAT GGGGCACGCC
CTCAATTTGA CGCTCCAGGA TATATTGTGC CGTTATAATC GGCAAAAGGG GAAAAAGGTC
CTCTGGGTGC CGGGCACTGA TCACGCCGGC ATCGCGACCC AGAATGTGGT CGAAAAAGCC
CTGGCCCAGG AAGGGACAAC CCGCCAGGAA CTCGGCCGGG AAGCGTTTGT TGAGCGCGTT
TGGCAGTGGA AAGAGGAGTA TGGCGGCAAG ATCCTGAACC AGATCCAGCG CATGGGCGCT
TCCGTGGACT GGTCCCGGCT CCGTTTCACC ATGGATGAAG GCTTGTCCCG GGCGGTGCGC
GAAGTCTTCG TCCAGTTGTA TGAAGACGGG CTGATCTACC AGGGCAATTA CATTATCAAT
TGGTGTCCCC GCTGCCACAC CGCTCTGGCC GATCTGGAAG TGGAGTACGC GGAAAAAGAA
GGCGGTCTCT ACGAAATCCG GTATCCGCTG GCTTCCGGCG AAGGCCATCT GGTCGTGGCC
ACGACGCGCC CGGAAACCAT GCTCGGCGAC ACGGCCCTGG CCGTGCATCC GGAGGATGAG
CGGTTCAGTC ACCTCATCGG CCAGACCGCC ATTGTTCCCC TGGTCGAACG GGAAATCCCG
ATCATCGGCG ATTCCTATGT CGATCGCGAA TTCGGGACCG GCTGTCTCAA GGTCACGCCG
GCCCACGATC CCAACGACTT TGAACTCGGG CGCAGCCACA GCCTGGACTC GGTCCGGGTC
ATTGACGACG CCGGGATCAT GACTGAAGCG GCCGGATCGG CCTACGCCGG CTTGGACCGG
TTCGCGGCCC GCAAGCAGGT GGTCCGGGAT CTCGAGGCCC AGGGGGCGCT GGCAAGCCAG
AAGAAATATC TGCACAACGT CGGGCATTGC TACCGCTGCG ACACTCCGAT CGAGCCCACG
GTCTCCAAGC AATGGTTTGT GGCCGTTGGC CCCCTGGCCA AGCGGGCCCG CGACGCCGTA
GCCGACGGAA AGACCCGAAT CGTGCCCGGC AATTGGGATA AGACCTATTT TGAATGGCTG
GATAATATCC GGGATTGGTG CATTTCGCGT CAGATCTGGT GGGGCCACCG TATCCCGGCC
TGGACTTGCC AGGAGTGCGG CAAACTCATT GTCAGCCGCG AGGACCCCAC GGTATGTCCC
GATTGCGGCC ATACCAGCCT GCACCAGGAC GAAGATGTCC TGGACACCTG GTTTTCTTCG
GCCCTGTGGC CGTTTTCCAC GCTGGGCTGG CCGGACGAGA CCCAGGAGTT GGCAACCTTT
TATCCGACTT CGGTTTTGGT CACCGGCTTC GATATTCTCT TTTTCTGGGT CGCCAGGATG
ATGATGATGG GACTGCACTT CAAGGACGAG GTCCCGTTTC ACGACGTGTA TATCCATGCC
CTGGTCCGGG ATGAGGACGG CCGGAAGATG AGCAAATCCA CGGGGAATGT CATCGATCCC
CTGGATATGG TTGCCAAATA CGGCACCGAC GCCTTGCGGT TTACGTTGAC CGCGTTTGCG
GCCATGGGCC GGGATATCAA GCTCTCCGAG AAGCGCATTG AAGGCTATCG CCATTTCATG
AACAAGATCT GGAACGCGGC CCGCTTCGCG TTGATGCACC TGCCTGGGGA CATGGGTGAA
CCCGAGCCGG ATCCCTCTGA CTCCCTGGTC CACCGCTGGA TCCTGCATCG CCTGGAAGAG
GTCAAGCAGG CGGTGGGGGC GGCCCTGGAA GAATACCGGT TCAATGATGC GGCCCAGGAA
CTCTACCAGT TTGTCTGGCA CGAGGTCTGC GACTGGTATC TGGAAATGGT CAAGCCGGAA
CTCTACGGCG AAGACGAAGC GGCCAAAAAC AGGGCCAGAA GTGTGCTGCA CACGGTGCTG
CGAGAAGTCC TGGTCCTTTT GCATCCGACC ATTCCGTTTA TCACCGCGGA AATCTGGAAC
AGCCTGCCCG GTGTGGGCGA GCGTGACCTG GCCGTGGAGC CGTTACCCGC CAGCCGCCCG
CACCTGGAAG ATTCGAGCGT CCAGGAATCC ATGGAATTCG TCCAGGAAGT GGTTGTCAGT
GTTCGGACTA TACGCGGCGA ACTGAATATC AATCCCTCCT TACCCCTGAC CACGCTGGTG
CGCACCAACG GCGAACAAGC CGATGTCCTG CGCGGGCAGG AGGAGGTCAT CCGCTTTTTG
GCCCGGATCG ATTCACTCCA GGTGGATGCA GAACTGGAGG CTCCCAAGGG GGCTGGGACA
GCGGTGGTCC GCGGGGCTGA AATTTTTGTC CCGTTGGAGG GGATCGTAGA TTTTGACGCG
GAACTGGCCC GCCTGGAAAA GGAACTCGCC AAACTCGACA AGACCCTGCA AGGGATTCAA
GGCAAGTTGG CCAACGCGAA TTTCGTGAAC AAGGCGCCGG CCGCTGTTGT GGACAAGGAA
AAAGCCAAAG CGGCGGAACT CGAAGAGAAA AAGGCCAAAA TGGTTACCCT GCAGCAACGC
TTGCAGGTCA TGAGCGGATA A
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| Protein sequence | MAEAHLSKGY EPKDVEDRWL DHWRENQTFS PDAELEDGQP PYSIVIPPPN VTGTLHMGHA
LNLTLQDILC RYNRQKGKKV LWVPGTDHAG IATQNVVEKA LAQEGTTRQE LGREAFVERV
WQWKEEYGGK ILNQIQRMGA SVDWSRLRFT MDEGLSRAVR EVFVQLYEDG LIYQGNYIIN
WCPRCHTALA DLEVEYAEKE GGLYEIRYPL ASGEGHLVVA TTRPETMLGD TALAVHPEDE
RFSHLIGQTA IVPLVEREIP IIGDSYVDRE FGTGCLKVTP AHDPNDFELG RSHSLDSVRV
IDDAGIMTEA AGSAYAGLDR FAARKQVVRD LEAQGALASQ KKYLHNVGHC YRCDTPIEPT
VSKQWFVAVG PLAKRARDAV ADGKTRIVPG NWDKTYFEWL DNIRDWCISR QIWWGHRIPA
WTCQECGKLI VSREDPTVCP DCGHTSLHQD EDVLDTWFSS ALWPFSTLGW PDETQELATF
YPTSVLVTGF DILFFWVARM MMMGLHFKDE VPFHDVYIHA LVRDEDGRKM SKSTGNVIDP
LDMVAKYGTD ALRFTLTAFA AMGRDIKLSE KRIEGYRHFM NKIWNAARFA LMHLPGDMGE
PEPDPSDSLV HRWILHRLEE VKQAVGAALE EYRFNDAAQE LYQFVWHEVC DWYLEMVKPE
LYGEDEAAKN RARSVLHTVL REVLVLLHPT IPFITAEIWN SLPGVGERDL AVEPLPASRP
HLEDSSVQES MEFVQEVVVS VRTIRGELNI NPSLPLTTLV RTNGEQADVL RGQEEVIRFL
ARIDSLQVDA ELEAPKGAGT AVVRGAEIFV PLEGIVDFDA ELARLEKELA KLDKTLQGIQ
GKLANANFVN KAPAAVVDKE KAKAAELEEK KAKMVTLQQR LQVMSG
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