Gene Dret_0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0245 
Symbol 
ID8418049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp306243 
End bp307442 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content59% 
IMG OID645036810 
Productsulfite reductase, dissimilatory-type beta subunit 
Protein accessionYP_003197125 
Protein GI258404383 
COG category[C] Energy production and conversion 
COG ID[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID[TIGR02066] sulfite reductase, dissimilatory-type beta subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.199901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA TTTCTTCCGG ATACAATCCA GACAAACCGA TGGAAAACCG GATCACAGAT 
ATCGGTCCGC GCAAGTATAC CGATTTCCTG CCTCCGGTTA TCAAGAACAA CTTCGGCAAG
TGGGCCTGGC ACGAGATCAT TGAGCCCGGC GTGCTGATGC ACAAGGCCGA CAGCGGTGAC
GAAGTCTACA CCGTGCGTTG CGGCGCCGCT CGTCTCATGG GTGTGCACAC CATCCGCGAG
ATCTGTGACA TCGCCGACAA GCATTGCGAC GGCTACCTTC GCTTCACGAC CCGGAACAAC
GTCGAGTTCA TGGTCGACAG CAAGGACAAA GTCGAGCCGC TGAAGCAGGA TCTGGCCAGC
CGTAAGTTCG ACGGCGGCAG CTACAAGTTC CCCATTGGCG GTACCGGTGC CGGTATCACC
AATATCGTCC ACACCCAGGG CTGGGTCCAC TGCCACACAC CGGCTACGGA CGCTTCCGGC
CCGGTCAAGG CGGTCATGGA CGAACTCTTT GAAGAGTTCC AGCAGATGCA GCTGCCCGCC
CAGGTCCGCA TCTCCCTGGC CTGTTGCCTG AACATGTGCG GTGCCGTGCA CTGCTCTGAT
ATCGCCATTC TCGGGTACCA CCGCAAACCC CCGCTGGTTG ACGATGAGTA CCTGGACAAC
CTCTGCGAAA TTCCTCTGGC TGTCGCCGCC TGCCCCGTGG GCGCGGTCAA GCCGAAAAAG
AAGGAAATCG TGGGTGAGAA GGGCGACACC AAGACGGTCA AGACCGTTGA AGTCAACGAT
GACCGCTGCA TGTTCTGCGG GAACTGCTAC ACCATGTGCC CCTCCCTGCC CCTGGCTGAC
CAGGAAGGCG ACGGTGTGGT CATCATGGTC GGCGGCAAGG TCTCCAACCG GATCTCCGCG
CCGAAGTTCT CCAAGGTCGC CGTGGCCTTT ATCCCCAATG AACCGCCGCG TTGGCCGAAG
CTGTGTGAAG CCATCCACAC CATCCTCAAT GCCTACAAGG AAGGCGCCCG CAAGTACGAA
CGCGTGGGCG ACTGGGCCGA GCGCATTGGT TGGGAACGCT TCTTTGAAGT CTGTGGCTTG
GATTTCTCCC ACCACCTGAT CGACGACTTC CGCGATCCGG CGTACTACAC GTGGCGCCAG
ACCACGAACT TCAAGTTCAC GGAACAATCG GTCAAATATC CTGACATCAA AGCCGAATAA
 
Protein sequence
MAFISSGYNP DKPMENRITD IGPRKYTDFL PPVIKNNFGK WAWHEIIEPG VLMHKADSGD 
EVYTVRCGAA RLMGVHTIRE ICDIADKHCD GYLRFTTRNN VEFMVDSKDK VEPLKQDLAS
RKFDGGSYKF PIGGTGAGIT NIVHTQGWVH CHTPATDASG PVKAVMDELF EEFQQMQLPA
QVRISLACCL NMCGAVHCSD IAILGYHRKP PLVDDEYLDN LCEIPLAVAA CPVGAVKPKK
KEIVGEKGDT KTVKTVEVND DRCMFCGNCY TMCPSLPLAD QEGDGVVIMV GGKVSNRISA
PKFSKVAVAF IPNEPPRWPK LCEAIHTILN AYKEGARKYE RVGDWAERIG WERFFEVCGL
DFSHHLIDDF RDPAYYTWRQ TTNFKFTEQS VKYPDIKAE