Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0245 |
Symbol | |
ID | 8418049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 306243 |
End bp | 307442 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645036810 |
Product | sulfite reductase, dissimilatory-type beta subunit |
Protein accession | YP_003197125 |
Protein GI | 258404383 |
COG category | [C] Energy production and conversion |
COG ID | [COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits |
TIGRFAM ID | [TIGR02066] sulfite reductase, dissimilatory-type beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.199901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTCA TTTCTTCCGG ATACAATCCA GACAAACCGA TGGAAAACCG GATCACAGAT ATCGGTCCGC GCAAGTATAC CGATTTCCTG CCTCCGGTTA TCAAGAACAA CTTCGGCAAG TGGGCCTGGC ACGAGATCAT TGAGCCCGGC GTGCTGATGC ACAAGGCCGA CAGCGGTGAC GAAGTCTACA CCGTGCGTTG CGGCGCCGCT CGTCTCATGG GTGTGCACAC CATCCGCGAG ATCTGTGACA TCGCCGACAA GCATTGCGAC GGCTACCTTC GCTTCACGAC CCGGAACAAC GTCGAGTTCA TGGTCGACAG CAAGGACAAA GTCGAGCCGC TGAAGCAGGA TCTGGCCAGC CGTAAGTTCG ACGGCGGCAG CTACAAGTTC CCCATTGGCG GTACCGGTGC CGGTATCACC AATATCGTCC ACACCCAGGG CTGGGTCCAC TGCCACACAC CGGCTACGGA CGCTTCCGGC CCGGTCAAGG CGGTCATGGA CGAACTCTTT GAAGAGTTCC AGCAGATGCA GCTGCCCGCC CAGGTCCGCA TCTCCCTGGC CTGTTGCCTG AACATGTGCG GTGCCGTGCA CTGCTCTGAT ATCGCCATTC TCGGGTACCA CCGCAAACCC CCGCTGGTTG ACGATGAGTA CCTGGACAAC CTCTGCGAAA TTCCTCTGGC TGTCGCCGCC TGCCCCGTGG GCGCGGTCAA GCCGAAAAAG AAGGAAATCG TGGGTGAGAA GGGCGACACC AAGACGGTCA AGACCGTTGA AGTCAACGAT GACCGCTGCA TGTTCTGCGG GAACTGCTAC ACCATGTGCC CCTCCCTGCC CCTGGCTGAC CAGGAAGGCG ACGGTGTGGT CATCATGGTC GGCGGCAAGG TCTCCAACCG GATCTCCGCG CCGAAGTTCT CCAAGGTCGC CGTGGCCTTT ATCCCCAATG AACCGCCGCG TTGGCCGAAG CTGTGTGAAG CCATCCACAC CATCCTCAAT GCCTACAAGG AAGGCGCCCG CAAGTACGAA CGCGTGGGCG ACTGGGCCGA GCGCATTGGT TGGGAACGCT TCTTTGAAGT CTGTGGCTTG GATTTCTCCC ACCACCTGAT CGACGACTTC CGCGATCCGG CGTACTACAC GTGGCGCCAG ACCACGAACT TCAAGTTCAC GGAACAATCG GTCAAATATC CTGACATCAA AGCCGAATAA
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Protein sequence | MAFISSGYNP DKPMENRITD IGPRKYTDFL PPVIKNNFGK WAWHEIIEPG VLMHKADSGD EVYTVRCGAA RLMGVHTIRE ICDIADKHCD GYLRFTTRNN VEFMVDSKDK VEPLKQDLAS RKFDGGSYKF PIGGTGAGIT NIVHTQGWVH CHTPATDASG PVKAVMDELF EEFQQMQLPA QVRISLACCL NMCGAVHCSD IAILGYHRKP PLVDDEYLDN LCEIPLAVAA CPVGAVKPKK KEIVGEKGDT KTVKTVEVND DRCMFCGNCY TMCPSLPLAD QEGDGVVIMV GGKVSNRISA PKFSKVAVAF IPNEPPRWPK LCEAIHTILN AYKEGARKYE RVGDWAERIG WERFFEVCGL DFSHHLIDDF RDPAYYTWRQ TTNFKFTEQS VKYPDIKAE
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