| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0234 |
|---|
| Symbol | |
|---|
| ID | 8418038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 296455 |
|---|
| End bp | 297024 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645036799 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003197114 |
|---|
| Protein GI | 258404372 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.668811 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.621002 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTACAAT CGACCCAGGA TATGGGGCAA CCGTTCGTCG ATCTGCTCCG GTCCCATAAA
AAGCCACTGC TCGAGCAGTG GTTTCACCGT ATTTTGGCGA CGTATCCCGA TGATACGGCC
AAATTTTACG GCAGCAAAAA GGACCCGTTC GCCAACCCGG TGGGCAACAC GCTGCACAAA
GAAATCGACG CCATTTTTGA TGAGCTGCTC TTGGAGCAGA GCTCGGATCT TCTGCCGTCA
GCGGTCGACG CCATTGTCAG AGTCCGCGCT GTCCAGGACT ACACCGCCTC GGCAGCGGTT
TCGTTCTTTT TGCTGCTCAA GGACGTGGTC CGGGAGAACG TGGGACAGGA GGCGCTGGAC
AACGGGCTGT ACCTTGACCT GCTCGCCTTT GAGGGGCGGG TGGACCAGTT GTGCTTGCTG
GCCTTTGACG CCTACATGCA GTGCCGGGAA AAAATCTGGT CCATGAAGGC CAATGAGGTT
CAACAACGGA CCAAAAACTT GTTGCGCCAA GCCAATATTG TGTGGACGGT TCCGGAGGAC
ACTCCGGAGT CTGGTGGGGG ACATCCCTAA
|
|---|
| Protein sequence | MLQSTQDMGQ PFVDLLRSHK KPLLEQWFHR ILATYPDDTA KFYGSKKDPF ANPVGNTLHK
EIDAIFDELL LEQSSDLLPS AVDAIVRVRA VQDYTASAAV SFFLLLKDVV RENVGQEALD
NGLYLDLLAF EGRVDQLCLL AFDAYMQCRE KIWSMKANEV QQRTKNLLRQ ANIVWTVPED
TPESGGGHP
|
|---|
| |