| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0210 |
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| Symbol | |
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| ID | 8418014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 265850 |
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| End bp | 266272 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645036775 |
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| Product | transcriptional regulator NikR, CopG family |
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| Protein accession | YP_003197090 |
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| Protein GI | 258404348 |
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| COG category | [K] Transcription |
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| COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
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| TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.547655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAAG CTGTCCGGGT CGCCATCACC CTCGATCCGA CCCTGCTCAA CAAATTCGAC
GAACTGTGCG CCAAGCAGAG CTATCAAAAC CGCTCCGAAG CCATTCGGGA CCTCATTCGC
AACAGCCTGG TCCAGCAGGA GTGGCGTGAA GAGGAGACCG GTGAAAGCGT CGGGACCCTG
ACGCTGGTCT ACGACCACCA CCACAGCGAT CTCGCCCAAC GGATGACTGA AATCCAGCAC
GAAGCCCTGG ACATCATCGT CACCTCCCTG CACTTGCATA TCGACGCCCA CAACTGCATG
GAAGTCCTGA TTCTGCGAGG GCCCAACACC CTGATCCGTG ATACGGCCCA GCGCATCATT
TCCACCAGGG GCGTCAAACA CGGCAAACTC ACCCTCTCGA CCACCGGAAA GGATCTCGTC
TAG
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| Protein sequence | MNKAVRVAIT LDPTLLNKFD ELCAKQSYQN RSEAIRDLIR NSLVQQEWRE EETGESVGTL
TLVYDHHHSD LAQRMTEIQH EALDIIVTSL HLHIDAHNCM EVLILRGPNT LIRDTAQRII
STRGVKHGKL TLSTTGKDLV
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