| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0201 |
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| Symbol | |
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| ID | 8418005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 253513 |
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| End bp | 254739 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645036766 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003197081 |
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| Protein GI | 258404339 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCAC AAACAACCCT TGAAGACATC ATCGGCATCG AGCATTCCAA ACTCGGTTTT
TTCCAGGAAG TCCAGCGCAA GGTCGCTGAA CTCAGACACT CCAACGAAGA GCTTGAACAC
AAGCAACGCG AAATCCAGGC CATTTTGGAC GGCATCTCGG ATATCATGCT CGTGCTCTCG
GCAGATATGC GCATTTTGTC CGTCAATCAG GTCTTTTTCG ACCATTTTGA AGAGCCCAAC
CCGGTCGGAA AATATTGTTT TGAGGTTTTC CGCGGCCAGG CCAAGGCGTG CCGGGGGTGT
CCGGCCCGCG AATCCATGCG CTCCGGGGAA GTCTGCAAGG AAACCGCCAT CTTCAAAGTC
AATGGACGCA ACCGGCAATA CGATATGTTG GCCTCTCCCT TGCAGGACAC CCCAGGACAA
GAAGGCCGGG TCCTGTTGTT CAAGCGGGAC GTGACCCTGG AAAAGGAGTA TCAGGCCCAA
TTCTATCAAG CCGAGAAAAT GGCCACCATT GGCATGCTCG CCGCAGGTGT GGCCCATGAA
GTCAACAATC CCCTGGCCGG CATCCAGGGC TTCGCTCAGG GGATCTTGCG GCGTCTGCCC
CGGGTTCAAG AGGCTGTGGA CGAGGAATTG GCCAACGACT TTCAGGAGTA CACCGAGACC
ATCCTCCAGG AATGCAACCG GTGCCAGGAA ATCGTGCGCA CCCTGTTGAC CTTCAGCCGC
CCCAGGGAAT CCGCCTTTTG CTCCTTGAGC ATGAACAACC TCATCCGGGA CACCTTGAAA
GTTCTCCAGC ACCGGATTAA ACGCCATCAG GGTCTGTTGC TCCAGGAAGA CCTGGAACCG
GAATTGCCCT TGGTTTGCGG CGACGAGCCC CATCTGAAGC AGGTCATTCT CAATCTGTTG
ACCAATGCCC TGGACGCCAT CGGCGAAGAG GGGGTGATCA CCATCCGTAC CTCGAGTACG
GAGAGTCAGG TCGCATTGTG CGTCGAGGAT ACCGGCGAGG GGATCCCGGA AGAACATCTG
GACAAACTCT TCGAGCCCTT TTTCACGACG AAGCCGGTCG GGCGTGGCAC GGGCATCGGC
CTGTCAACCT GCTACACCAT CGTCCATAAC CACGGCGGTG AGATTTCCGT CAAAAGCGCC
CCTGAAAAGG GGAGCCGCTT TTGTGTTGTC CTCCCTAAAC GGCAAGGAAA CGCTTGTGAA
CAGCCAATCA CTTGTACTTA TCGTTGA
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| Protein sequence | MAPQTTLEDI IGIEHSKLGF FQEVQRKVAE LRHSNEELEH KQREIQAILD GISDIMLVLS
ADMRILSVNQ VFFDHFEEPN PVGKYCFEVF RGQAKACRGC PARESMRSGE VCKETAIFKV
NGRNRQYDML ASPLQDTPGQ EGRVLLFKRD VTLEKEYQAQ FYQAEKMATI GMLAAGVAHE
VNNPLAGIQG FAQGILRRLP RVQEAVDEEL ANDFQEYTET ILQECNRCQE IVRTLLTFSR
PRESAFCSLS MNNLIRDTLK VLQHRIKRHQ GLLLQEDLEP ELPLVCGDEP HLKQVILNLL
TNALDAIGEE GVITIRTSST ESQVALCVED TGEGIPEEHL DKLFEPFFTT KPVGRGTGIG
LSTCYTIVHN HGGEISVKSA PEKGSRFCVV LPKRQGNACE QPITCTYR
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