Gene Dret_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0198 
Symbol 
ID8418002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp249826 
End bp250467 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID645036763 
Productheterodisulfide reductase subunit C 
Protein accessionYP_003197078 
Protein GI258404336 
COG category[C] Energy production and conversion 
COG ID[COG1150] Heterodisulfide reductase, subunit C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCA TCAATCTTTC CACCCACACC GACCCTGCCT TTACCCAACA GGTCAACGAG 
GAAAGTCACC AGGATGTCGC CCTGTGCTAC CAATGCGGGA ACTGCACGGC GGGCTGTCCT
TACACCTTCG TCTATGACAT CCCGGTGCAC CAGATCATGC GCCTCGTTCA GGCGGGACAA
AAAGACACGG TTCTGCGCAG CCGGTCGCTT TGGCTCTGCG CCACCTGTCA ATCCTGCACC
ACCCGCTGTC CCAACAATAT CGATGTGGCC CAGATCATGG ATGTTTTGCG GCATATGGCC
CGCCGGGAAG GCTACGTCAC CGAACGCAAC GTCAAACTCT TTTATGACGC CTTCCTGGAA
TCGGTCCACA AACACGGCCG GGTCTATGAA CTCGGGGCCA TGTCTTCGTA CATCGCCCAC
AGCAAACGGG TCATGACCGA TGCCGAATTG GGCCCCACGG TCATGGCCAA GGGCAAGCTC
AGCTTCACCC CCCACAACAT TGAGGGCAAG GAGCACGTCG CCGCAATTTT TGATCGCTAT
ATGGAAAAAC AGGAACAAGG ACGGGAAGCC TACCGTCCTT TTCAGGCCGA ACGTATGAGT
CCAGTGGCCG CGTGGCTGCG CCGACTGAGG AGGGAAGAGT AA
 
Protein sequence
MQTINLSTHT DPAFTQQVNE ESHQDVALCY QCGNCTAGCP YTFVYDIPVH QIMRLVQAGQ 
KDTVLRSRSL WLCATCQSCT TRCPNNIDVA QIMDVLRHMA RREGYVTERN VKLFYDAFLE
SVHKHGRVYE LGAMSSYIAH SKRVMTDAEL GPTVMAKGKL SFTPHNIEGK EHVAAIFDRY
MEKQEQGREA YRPFQAERMS PVAAWLRRLR REE