| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0144 |
|---|
| Symbol | |
|---|
| ID | 8417948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 186159 |
|---|
| End bp | 186788 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645036709 |
|---|
| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
|---|
| Protein accession | YP_003197024 |
|---|
| Protein GI | 258404282 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.52772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGA TCGTCCTTGC CACCGGCAAT GCAGGAAAAA TCAAAGAACT GCAGGCCATG
TTCGCCGCCA GCGGTCAGAG CCTGACCATC CTGGGGCTTG ACGCTTTTCC GGATATCGGT
CCCCTTTCGG AAACTGGCAC CACTTTTGAG GCCAATGCCC TGGAAAAGGC CCGGGCAGTT
GCCGTCGCCA CACAGCGCAT CGCCATCGCC GACGACTCCG GTTTGGAGGT CGATGCCCTG
GATGGTGCGC CCGGCGTCCA TTCAGCCCGG TACAGCGGCC CTGGAGCCAA CGATTCACGC
AATAACGCCA AGCTTCTGGA AGCCTTGGCT GACATCCCGG CGGAAAAACG TACCGCCCGA
TTCCGCTGCG TCCTGGCCGC GGTAGCCCCT AATGGAGCGG AATTGACCGT GGACGGGAGT
TGGGAAGGAG TGATCGCCGA AAAACCGGCC GGCGACAACG GCTTTGGCTA CGATCCCCTC
TTTTTCGACC CGGAATGCGG CTGCACCAGC GCCCAACTGC CGCCAGCGGA AAAAAACAGC
CGCAGTCACC GTGGCAAGGC GTTGCAGGCT TTGGCTGGTC AATGGTCCCG GTTCGCGGCT
CGCGCCGCCT CCCCCAAAAC CTCCGAGTAA
|
|---|
| Protein sequence | MTEIVLATGN AGKIKELQAM FAASGQSLTI LGLDAFPDIG PLSETGTTFE ANALEKARAV
AVATQRIAIA DDSGLEVDAL DGAPGVHSAR YSGPGANDSR NNAKLLEALA DIPAEKRTAR
FRCVLAAVAP NGAELTVDGS WEGVIAEKPA GDNGFGYDPL FFDPECGCTS AQLPPAEKNS
RSHRGKALQA LAGQWSRFAA RAASPKTSE
|
|---|
| |