Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0138 |
Symbol | |
ID | 8417942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 179501 |
End bp | 180706 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645036703 |
Product | beta-lactamase domain protein |
Protein accession | YP_003197018 |
Protein GI | 258404276 |
COG category | [C] Energy production and conversion |
COG ID | [COG0426] Uncharacterized flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.392817 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCA CCGAACTGAA AAAAGATATT TACTGGGTCG GCAGTGTCGA CTGGAATCTG CACAATTTTC ACGGGTATTC CCAGGCCCAT CGGGGCACCA CCTACAACGC GTATCTGGTT ATCGACGAAA AAATCACCCT CTTCGACACC GTTCCCGCGA AATACAGCGG CGAACTCATG CACCAGATCC GGCGCCTGAT TGACCCCGAA AAAATCGATT ACATCGTGGT CAACCATGTC GAACCAGACC ACTCCGGCGC TCTGCCGCAT ATTGTGGACA CCATCAAACC TTCGAAAATC TTTTGCTCTC CCATGGGCAA ACAGGCCATT GGCGAATACT TCCACCGCGA CGACCTGCCC CTGGAAGTCG TCAAGAACGG GGCCTCCATT TCCTTGGGCA AACGCTCCGT GGAGTTCATG GAAGCCCGGA TGCTCCACTG GCCCGACTCC ATGTTCTCCT TCATCCCTGA AGACAAGCTG CTCATTCCCA ACGACGCCTT CGGCCAGAAT TGGGCCGGCA GTGAACGGTT CGACGACGAA GTCGATCTCT CCATGCTCCT GCGGGAGGCG GCCCATTACT ACGCCAACAT CATCCTCCCC TTTTCGCCGT TGGTCCAAAA GGTCCTGGGA AAAATCCAGA AGGCCGGATG GGACATCGAC ATGATCGCCC CGGACCACGG CCTGATCTGG CGCAGTCACG CCAAGGAGAT CATCGAGGCC TATGACCGCT TCAGCAAACA GGAGCCGCAG CAAAAAGCGG TCATTGTCTA CGATACCATG TGGCACAGCA CTGAGCAGAT GGCCAAAGCC ATCGGCGACG CCCTTATCGA GGAGGGAGTT CCCACCCGGC TGATGCACCT CAAGGCCTAC CACCACAGCG ACGTCATGCT CGAGGCCTGG GACGCTGCGG CCATCATTTA CGGCTCCCCC ACACACAACA ACGGGATCAT GCCCCTGGTC TCAGACATGG CTACTTATAT GAAAGGTTTG CGCCCTGCCA ACAAGATCGG TGCCGCTTTC GGCTCCTACG GCTGGAGCGG GGAATCGGTG AAGCATCTGA CCGAACTGTT GGAAGGCATG GGGTTTGAAC TCCCTGTCGA CGGAGTGCGC TCCAAATTCC GTCCAAACCA CGATGAACTC GCCCAGTGCA AAGAAATGGG CCGGCAGTTG GCTGCGGCGA TCAAAGAAAA AGTCAACGCT TCCTGA
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Protein sequence | MSVTELKKDI YWVGSVDWNL HNFHGYSQAH RGTTYNAYLV IDEKITLFDT VPAKYSGELM HQIRRLIDPE KIDYIVVNHV EPDHSGALPH IVDTIKPSKI FCSPMGKQAI GEYFHRDDLP LEVVKNGASI SLGKRSVEFM EARMLHWPDS MFSFIPEDKL LIPNDAFGQN WAGSERFDDE VDLSMLLREA AHYYANIILP FSPLVQKVLG KIQKAGWDID MIAPDHGLIW RSHAKEIIEA YDRFSKQEPQ QKAVIVYDTM WHSTEQMAKA IGDALIEEGV PTRLMHLKAY HHSDVMLEAW DAAAIIYGSP THNNGIMPLV SDMATYMKGL RPANKIGAAF GSYGWSGESV KHLTELLEGM GFELPVDGVR SKFRPNHDEL AQCKEMGRQL AAAIKEKVNA S
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