Gene Dret_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0106 
Symbol 
ID8417910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp141458 
End bp142153 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content57% 
IMG OID645036671 
Productregulatory protein MerR 
Protein accessionYP_003196986 
Protein GI258404244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATG ACCTGCTCAG TATCAAAGAA ATCGCGCGTC AGCTCGAAGT ACCGGAGAGC 
AATGTCCGCT ATTGGCGGGA TCGTTTTGAA GATTATTTAC CGGTGGTTGG CGAAGGACGC
AAGCGGCGGT ACAAAAAGCA GGCCCTGGAT ATCTTCCAGG CCATTCGTGA TGGCTATCAG
GCCAATCAAT CCACCGAGGA CATCGCCCGA GACTTAGCCA GGAATTACCC GCGCACCATG
CGGGTCGCGC CGGACGAGCC CGCCCAGGAT CCCGCAGCAG AAATCCAGTC CGTCCACTCG
CCTTTCGAAT CCGTCCAGAC CCTCGTCCAG AGTCAGGCCA AGACGCTGGA ACATCTTGCC
AGCTCCCTGA ATGCTTCGCA CAGCCTCGAT CCCCGCCTCA AAGAACTCCA ACACCGCCAG
GAAGTGCTGC ACAAGGCCCT TGCTTCACTC TGGAAACACC ACAAGATGCA GCGCCGCCAA
CTCCATGAAG CCAGGATGGA AAGTGCCCAG GCCCGGGCGG AGCAGCAAAA ATTGGAACAA
CGCCTGCAAA GCCTGGAACA CGTAGTGGCA GAACACGCGG AGGCCCAGCG TGAGGAGCGG
CACAAACTCG AAAAAGAAAT TGGCCAATAC CGGTATTGGC TCAAAAAACT GGTGGCCCAC
CTCGACCCGG AACGCCAAGG GAATTCTTGC TCATAA
 
Protein sequence
MEDDLLSIKE IARQLEVPES NVRYWRDRFE DYLPVVGEGR KRRYKKQALD IFQAIRDGYQ 
ANQSTEDIAR DLARNYPRTM RVAPDEPAQD PAAEIQSVHS PFESVQTLVQ SQAKTLEHLA
SSLNASHSLD PRLKELQHRQ EVLHKALASL WKHHKMQRRQ LHEARMESAQ ARAEQQKLEQ
RLQSLEHVVA EHAEAQREER HKLEKEIGQY RYWLKKLVAH LDPERQGNSC S