Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0104 |
Symbol | |
ID | 8417908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 138947 |
End bp | 140266 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645036669 |
Product | aromatic hydrocarbon degradation membrane protein |
Protein accession | YP_003196984 |
Protein GI | 258404242 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.881453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAGG TTGTGCTATT CACATTCGCG TTGCTCACAC TGAGTTTTTC CACAGCCAAC GGCGCCGGCT TCGCCACGTA CGAGTGGAGC GCCCGCGGCA ACGCTCTCGG CGGCTCCGTA GTCGGTATGG CCGACGATCC GGCCGCGGTG GCGTCCAACC CAGCCGGTAT CACCCAACTC GAGGGCGGCC ACGGCCTGTT TGGCCTGACA GCCATTTATC CCCAGGCCGA GGTGACCACG AAACCCCAAG GGGGACCTGA ACAAACCACC AGCGGCGAAG ACAATATCTG GACCCTGCCC CACGCCTATT ACACCCGCCA GCTCTCCGAC CGCTACTGGC TCGGCCTCGG CGTGTTCACC CGCTTCGCCC TGGGCACAGA ATACCACGAC GACTGGCCCG GCCGTTACAA CACCCGCTAC ACCGGCATCA AGACCGTCTC CTTCAATCCC AACCTGGCCA TGAAACTCAC GGACACGGTC TCTCTGGCCG TGGGCGTTGA AGTGATGCAT ATGGATTTCC AGCAGCGGAA AGTTAAGGAC GCCTCAGCTT TGGCAGGACA AAAAACTGAT CCTGAAACAA CCACATACGA CTTTAGCGCT GACCTTAATG GTCAAAGTCA AGGTGTTGGA TTTAATATCG GTTTACATTA CAAGCCCCTG GATTGGATCC AAGCCGGGAT TATCTACCGC AGTCCGGTAG ATCAAAAAGT GGAAGGGGAG GTTAACTTCG ATCGGTCTAA TTTATCTAAG TTAACAGCCA TTAATCCAGC ATATGGTGGT TCTTTTCAAG ACATGGATGC ATGGGGAGAG ATCACCTTAC CCGACAGTTT TCAGGCCGGC ATAGCCTTTA ATCTTACCCA AAAGCTGACT GTGGAAGTGG GTGGAGCTTA CACCTTTTGG AGCAAATACG ACGAATTGAC TTTCAATTAC GAAAAACCTG TGATCTCAGT CAAACCTTCT TCAGATACAT CAACTACCCC AAAAAGCTGG GAAGACACTT GGCGATTCAA TATCGGCGCG GAATACGCCG TGACCCCGTG GTGCGATCTG CGGGCCGGGT ATGTCTACGA CCAGTCTCCT GTTCAGGATG AATACGCCGA TTATCTCATC CCGGCTGATG ACCGCCAGAT CTTCTCCTTT GGCACCGGCT TCGCCCTGAA CGAGCAATGG ACCCTGGATC TTTCCTACAA CTACATCATG ATCCAAGATC GGACCGTTGA TTACGACGAA GTACGCGTCG AAGACGAAGG CGTCTACGCT GCGGAATTCG ACAACGCCAA CGCCCACATG GTCGGCATGA GCCTCGGCTA CGAATTCTAA
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Protein sequence | MRKVVLFTFA LLTLSFSTAN GAGFATYEWS ARGNALGGSV VGMADDPAAV ASNPAGITQL EGGHGLFGLT AIYPQAEVTT KPQGGPEQTT SGEDNIWTLP HAYYTRQLSD RYWLGLGVFT RFALGTEYHD DWPGRYNTRY TGIKTVSFNP NLAMKLTDTV SLAVGVEVMH MDFQQRKVKD ASALAGQKTD PETTTYDFSA DLNGQSQGVG FNIGLHYKPL DWIQAGIIYR SPVDQKVEGE VNFDRSNLSK LTAINPAYGG SFQDMDAWGE ITLPDSFQAG IAFNLTQKLT VEVGGAYTFW SKYDELTFNY EKPVISVKPS SDTSTTPKSW EDTWRFNIGA EYAVTPWCDL RAGYVYDQSP VQDEYADYLI PADDRQIFSF GTGFALNEQW TLDLSYNYIM IQDRTVDYDE VRVEDEGVYA AEFDNANAHM VGMSLGYEF
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