| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0095 |
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| Symbol | |
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| ID | 8417899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 126452 |
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| End bp | 128056 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645036660 |
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| Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
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| Protein accession | YP_003196975 |
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| Protein GI | 258404233 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.360671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGAA AAAAAATGTG TATTGGCATC TTGGGGCTGA TGCAGGCCCT TTTTCTTTTT
CTGCCAGCCA GCCGGGCCGT GGCGGCGGAC GATCCGCTGA CCCTGCTCCT GGTGCCGGTG
GAGGAGGAGA ATGTCGTCTT CCGGCAATTT TTGCCGGTGA AACACTACCT CGAAAAGCGT
CTCAACCGCC GCGTGGAACT TGATATCGCC CACAACGCCG AGGCGGCCCT GGACCGCCTC
GGGCAGGGGC AGGTCGATCT GGCCTACCTC GACCCCTCGG CGTATTGCGA GGGCAAGAGC
ATGTACCAGC TGCACCCGGT GGCCAAAGTG GTCAAGAACG GTGAGGGGCA ATACCGTTCG
GTCCTGGTGG TGCGAGACGA TTCGCAGGTG GAAAAAATCG TGCAGATCCC GGGCAGAAGT
CTGGCCCTGG GCAATACACG CTCCTCCTCG GCCTATCTCA TGCCCTTGGC CATGCTCCAG
GAAATCAAGC TGGACCTTGA AGATTTTTCC CAGGTCGGTT TCCTGCAAAA GGAAGACCTG
GTGGCCTTGT CGGTTCTGGT CCGCGATTAT GATGTCGGGG CCATGAGTCA GGAGGTCGCC
CGGAAATACC TGCCCTACGG ATTGCGGATT ATTAAAAAGT CCGAAAAACT GCCGCAATTT
ATTATCTCGT CCGCCCCGCA GATGGACGTG GAGGAACGTA ATGCGTTGCA GACCGCGCTT
CTGGAATACA CGCCCCAGGA CTTCGATACG GTTTCCTTTG CTGAAGCCGA AGACCGCGAA
TACAACGTCG TCCGGATCAT GCTCAAAAAT ATCACCGGCA AAGACTATCT GGCCTACCCG
GAGGGAGCGG TCAAACTGGC GCTTTTACCC CTCTACTCCC CGATCACCCT GGATAAGATG
TTCGCTCCCC TGGCCGAATA TCTGACGCAG GAGACCGGGC GGGAGTTCCG GCTGGTTATC
CCCCGGGATT TCGAGGAATT TGTCTCCATT GTCAGCAATG GCGAAGTCGA TTTCGCCTAT
CAAAATCCCT ATGTCTATCT CCTGCTCGGC CAGCGCGGCA AACTCCAGTC GCTGGTGACG
ACGATCAGTC CCGAACCCGA GACCTCACGG GAAGAATTCC GGGGCGTCAT CCTGGTGCGT
AAGGATTCGG CGATTTCCAG CCTGGAAGAC CTCAAGGGCA AGGATATCAT GATCGTTTCC
CGCCGTTCTG CCGGGGGGTA CCGGTTCCAG AAAATTCTGC TCCGCCAGCA CGGCATCGAC
ATCGCCCGAG AAGCGCGTCT TGAAGAGGGC AAAAAACACG AGGAGGTCGT GCTTTCGGTC
TACCGCGGTG AGGCGGATGC CGGTTTCGTC CGCGAAGCCG CCTTGCAGGT TGCCAAAGAT
ATTGTGGATA CCAGCGATTT GCGTGTCCTG GCGACCACGG AATACTATCC CAACTGGCCC
TTTGCCGCGT ATACCGAAAC CGATGCCGAT CTGGTGGCCA AGGTCCGCTC GGCCCTGCTG
GCCATCGAGG ACCCCGCTTT CCTTGAGGAA GCCCGGATCA ACGGTTTCAC CCAGAGCCAG
ATGAAACGGC TGCAGCAGCT CAAAGAGAAG GTGGTCCTGG AATGA
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| Protein sequence | MQRKKMCIGI LGLMQALFLF LPASRAVAAD DPLTLLLVPV EEENVVFRQF LPVKHYLEKR
LNRRVELDIA HNAEAALDRL GQGQVDLAYL DPSAYCEGKS MYQLHPVAKV VKNGEGQYRS
VLVVRDDSQV EKIVQIPGRS LALGNTRSSS AYLMPLAMLQ EIKLDLEDFS QVGFLQKEDL
VALSVLVRDY DVGAMSQEVA RKYLPYGLRI IKKSEKLPQF IISSAPQMDV EERNALQTAL
LEYTPQDFDT VSFAEAEDRE YNVVRIMLKN ITGKDYLAYP EGAVKLALLP LYSPITLDKM
FAPLAEYLTQ ETGREFRLVI PRDFEEFVSI VSNGEVDFAY QNPYVYLLLG QRGKLQSLVT
TISPEPETSR EEFRGVILVR KDSAISSLED LKGKDIMIVS RRSAGGYRFQ KILLRQHGID
IAREARLEEG KKHEEVVLSV YRGEADAGFV REAALQVAKD IVDTSDLRVL ATTEYYPNWP
FAAYTETDAD LVAKVRSALL AIEDPAFLEE ARINGFTQSQ MKRLQQLKEK VVLE
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