| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0086 |
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| Symbol | |
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| ID | 8417890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 116843 |
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| End bp | 117577 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645036651 |
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| Product | RNA methyltransferase, TrmH family, group 3 |
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| Protein accession | YP_003196966 |
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| Protein GI | 258404224 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACCGAAT ACAGCCACGT TGTTGCCGGA CTCCATCCGG TCAAGGAACT CCTGGAACGG
ACACCGGACC GGGTGGAAAC CGTCTTGCTC CAAAAAGGGG GGAGACAGCA AAAAGAGATC
AAAGATTTGT GTCAGGCAAC CGGGATCCGG TTCCAGATTT TGCCCCGGGC CCAGCTCGAT
AAGCTCATAT CAGCCCACCA CCAGGGCATC GCCGCCCGTG TCTTCAGCCC GGGGTTCGTC
GATCCGCAGG TCCTGCTGGA AACCGTTGCG GACGCTCCTT TGCCCTTGCT CATCGCTCTG
GACCAAGTCC AAGACCCCGG CAACATCGGC ACCCTGGCCC GCACCCTCTA CAGTCTGGGG
GGCGCCGGCC TGGTTTTGCC CAAAAACAGG AGCGCTCCCC TTGGTGGCGG CGCCTTAAAG
GCCTCCTCCG GGGCGCTCAA CTATTTGCCG GTGGCCCAGG TCACCAATTT GGGGCGGTTC
CTGGAACAGG CCACGCAAGC CGCTCTCCCG GTCATCGGCA CCGGCCTGAC TCCCGATTCC
CTAAGCGTCT ACAAGGCGCG ACTCTCCACG CCTGCCGTCC TGGTGCTCGG CAACGAACAC
AAGGGCATGC GCCCCGGGGT GGCCAAAAAA TGCGAAACCG TGGTCTCCAT CCCCTTGCAG
CGCCAATTCG ATTCCTTGAA CGTGGCTCAG GCCGGGGCCA TTTTGATCAG CGAATTCCTG
CGCCAGCGGG GCTGA
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| Protein sequence | MTEYSHVVAG LHPVKELLER TPDRVETVLL QKGGRQQKEI KDLCQATGIR FQILPRAQLD
KLISAHHQGI AARVFSPGFV DPQVLLETVA DAPLPLLIAL DQVQDPGNIG TLARTLYSLG
GAGLVLPKNR SAPLGGGALK ASSGALNYLP VAQVTNLGRF LEQATQAALP VIGTGLTPDS
LSVYKARLST PAVLVLGNEH KGMRPGVAKK CETVVSIPLQ RQFDSLNVAQ AGAILISEFL
RQRG
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