| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0085 |
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| Symbol | |
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| ID | 8417889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 115576 |
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| End bp | 116283 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645036650 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_003196965 |
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| Protein GI | 258404223 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACAC AGACGCCCTA TGCCGAGCGG GTGCAAGAGA TCAAGGAAAC GATGGCCGCG
GCAGCGCGCG CGGCCGACCG CGATCCGGCC GAAGTGACCC TGGTCGCTGT TTCCAAATAT
CAACCGATAG AGGCCATTGC CGCCGTGCAT GCCGCGGGGC AGACCCATTT TGGGGAGAAT
TACATTCAGG AGGCCCTGGA TAAACAGGAC CAATGCGACA TCTCCCCCAT CCAGTGGCAT
TTCATCGGCC ATTTGCAGCG CAACAAAGCC AAATTCGTGC CTGGGCGCTT TGATCTGGTG
CACACCGTGG ATTCGGTGCG CCTGGCGCAG ATGCTGGATA AAAAAGCCGC GGAAGCTGGT
GTGGTGCAGG CCATATTGCT GCAGGTCAGC CTGGCCGGAG AAGAGCAGAA GGCGGGGCTG
GCACCGGAAG CATTGGAGGA GACCCTTGAC ACGGTGGGGC AGCTGCCCCA CCTGCAACTG
CAGGGGTTTA TGACCATGCC GCCGTATTTT AATGACCCGG AACGGGTCCG TCCTCTCTTT
TGCCGTCTGC GCGAACTCCG TGACGAGGCG CAAAACCAGC TGGGCAGGGA GTTGCCGCAT
TTGTCGATGG GCATGAGCGG GGATTTTGAG GTGGCCATCG CTGAGGGCGC GACCCTGGTG
CGCGTCGGGA CCCGGATTTT CGGGCCGCGG CCGCAAAAGA GCCTGTAG
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| Protein sequence | MDTQTPYAER VQEIKETMAA AARAADRDPA EVTLVAVSKY QPIEAIAAVH AAGQTHFGEN
YIQEALDKQD QCDISPIQWH FIGHLQRNKA KFVPGRFDLV HTVDSVRLAQ MLDKKAAEAG
VVQAILLQVS LAGEEQKAGL APEALEETLD TVGQLPHLQL QGFMTMPPYF NDPERVRPLF
CRLRELRDEA QNQLGRELPH LSMGMSGDFE VAIAEGATLV RVGTRIFGPR PQKSL
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