| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0079 |
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| Symbol | |
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| ID | 8417883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 105309 |
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| End bp | 106487 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645036644 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_003196959 |
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| Protein GI | 258404217 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG CCACACGCCT GTCTCAGATC AAACCTTCCC CCACCCTCGG CCTCAACGCC
CAAATCCAGG AGATGAAAGC GGAGGGCCGT TCCGTTGTCA GCCTCGCCGT GGGCGAACCG
GACTTTCCCA CGCCGGCGCA CGTTTGCCAG GCTGCCAAGG CCGCTGTGGA CGAGGGATTT
ACAGGCTATA CCGCGGTGCC AGGCATGCCC TCGCTGCGCC AGGCAGTGGC TGGATACTAC
CAGACCCAAT ACCAGGTGCA GGCCCAGGCG GACAACACCA TCGTCAGCAA CGGCGGCAAG
CAGGTCCTCT ACAATCTCCT CCAGGCCTTG GTCGAACCGG GTGACGAAGT CCTGCTCCCG
GTCCCCTACT GGGTGAGTTA TCCCCCGCTG GTCGCTCTTG CCGGCGGCAT CGTCCAGGAG
GTCCCCAGTA CAGCCGCGGA CGATTTCCTG GTCACCGCAG ACCAATTGGA GGCCTGCCGC
ACCCCGCAAA GCCGTTTCCT CATCCTCAAC ACCCCGTCGA ACCCTACCGG CAGCCACTAC
AGCCAACAGC AGCTCGACGC GCTGATCGAA TGGGCGCTCA GTCACGATAT CTTCGTCATT
TGCGACGAAA TCTACGACCA GCTCATCTAT CCACCAGCCG GACCGGCTAC TGCAAGCCGC
TGGTGGCAGC AGGCCCCGGA TAAAATCGCT GTGGTCAACG GGTTGTCCAA AAGTTTTGCC
ATGACCGGGT GGCGGATCGG TTTCGGGTTG GCTCACGCCG ATTTGATCAA GGCCATGACC
AAACTGCAAG GCCAATCCAC ATCCAATATC TGCTCCATCG CCCAACGAGC CGCAGAAGCC
GCCCTGACTG GCACCTGGGA CCAGGTGCGG ACCATGCGCG ACTCCTTTGC CAAACGGCGC
GATCTGGCCC TGGAATATAT TGCCGCCTGG CCGGGAACCA CGTGCCCCCG CCCGGCCGGG
GCCTTTTACC TCTTCCCCCA CCTTGGCGAC TGCCTGGAAG GGTCCGCTAT CCCGGATTCG
GCGGCGCTGG CTTCACACAT CCTGGAACAG ACCGGCATTG CCGTGGTGCC CGGCAGCGCG
TTTGGCGACG ACGCCTGCCT GCGCCTGTCC TATGCCGTCG ACGAAACCAC ATTGACCGAC
GCCCTGGAGC GCATCGGAAA GGTCCTGCAG CAACTCTAG
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| Protein sequence | MRIATRLSQI KPSPTLGLNA QIQEMKAEGR SVVSLAVGEP DFPTPAHVCQ AAKAAVDEGF
TGYTAVPGMP SLRQAVAGYY QTQYQVQAQA DNTIVSNGGK QVLYNLLQAL VEPGDEVLLP
VPYWVSYPPL VALAGGIVQE VPSTAADDFL VTADQLEACR TPQSRFLILN TPSNPTGSHY
SQQQLDALIE WALSHDIFVI CDEIYDQLIY PPAGPATASR WWQQAPDKIA VVNGLSKSFA
MTGWRIGFGL AHADLIKAMT KLQGQSTSNI CSIAQRAAEA ALTGTWDQVR TMRDSFAKRR
DLALEYIAAW PGTTCPRPAG AFYLFPHLGD CLEGSAIPDS AALASHILEQ TGIAVVPGSA
FGDDACLRLS YAVDETTLTD ALERIGKVLQ QL
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