Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0078 |
Symbol | |
ID | 8417882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 103606 |
End bp | 105033 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645036643 |
Product | histidine kinase |
Protein accession | YP_003196958 |
Protein GI | 258404216 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGAACTC CCCTTCGGCC CAATCCGGCC CACCCTTTTC AGCTCGTGAA ATTCCTGTCC TGGAGTTCGC TGTTTATCAT CCTGGGCTCG ATCTTTTTCC TGGCTCTGAC CATCGGCAAT TCAGCCAAGC AGGCGGTAAT GCAGAAGCAC CGCGATTTTG CCCTGTTGCT GGCCGAAAAT CTCAACCACC AGATCTACCA ACGGTTCACC CTGCCCACGG TCCTCGGATT CGGACGCATC CAACTCAAAA ACGAGGCCCA GTACCAGCGC CTGGAAGAAA CCATCCAGTC CACCATCCAC AGCTTCCATG TCCTGGATGT GCGCATCTAC GACTGGGAAG GCATGGTCGT CTATTCCACG GACAAGACCC TGGTCGGCAA GGCCGGCCTG GCTGGACCTG AAGTCAAAAA AGCGGTCGAC ACCGGGGAGC CCTCGTTCAC CGTCCAGGGC GAACTCTCGT TCTGGCGGGC CATGTTCGAC TTCGATCTGC CTGCCAAGAC CTTTGTTCTG CGCACGACCT ACCCCCTGCG TGCGGAGCGG ACCCTCCAGC CGTCGCAAAA GGCCGGGCCG ATCATGGGCA TCCTCGAATT CCGCCAGGAC ATCAGCAAGG ACTACGAGAC CATCCTCCGC TTTCAGTGGG TGGTCGTCTT TCTGGCCCTG GGGGCTTCCC TGATACTTTT TCTGCTCTTA TATATCATCA TTAAACGGGC CGATCGCCTT CTGGCCGAGC GAATTCAGGA AAAGGAACGC CTGGAGCGCG AACTGCTGCA AAACGAAAAA CTGGCCAGCA TGGGGCGCAT GGTGGCCAGT ATCGCCCATG AGATTCGCAA CCCGCTGGGG ATCATCCGCT CCAGTTCGGA AATGCTCTAC AAGAAGGCGC TGCGCGATAA CAGCCAGAAC GCCCGGTTGC TGCACGCCGT CTTCCAGGAA TCCAAACGCC TCAGTCAAAC CGTGCATGAA TTTCTCGACT ACGCCCGGCC CAAACAGCCA GCCATGCGCG AGGTGGATTG CAGCCAGATC CTCCAGCGGG CCCTGGCCTT TCTGGAACAG GAATGCGCCG CCCACGAGAT CCAGGTGACC ACTGCCCTGC CGGAAACTCT GCCGAGCCAG GGTGATGACG ACCTGCTCTA CCGCGCCTTT TACAACATCA TCAGCAACGC CTTGCAGAGC ATGGACGGCG GCGGAGAACT GGACATCAGC GGCGGCAGGG AGGAGGATCA GATCTGGATC TGCATCCGGG ACACTGGCCC CGGGTTCGAC GCCACCATGC TCGACAAGTA CCTTGAACCC TTCTATACCA CCAAGGATCA AGGGACCGGT CTCGGTCTGG CCATCGTCAA GAATATTGTC GACAGCCACG GCGGTTCCCT GAACATCACC AACACCGAGA CCGGAGCCGA GGTCTGCATC CGGCTCCAGG CGGGTTGA
|
Protein sequence | MRTPLRPNPA HPFQLVKFLS WSSLFIILGS IFFLALTIGN SAKQAVMQKH RDFALLLAEN LNHQIYQRFT LPTVLGFGRI QLKNEAQYQR LEETIQSTIH SFHVLDVRIY DWEGMVVYST DKTLVGKAGL AGPEVKKAVD TGEPSFTVQG ELSFWRAMFD FDLPAKTFVL RTTYPLRAER TLQPSQKAGP IMGILEFRQD ISKDYETILR FQWVVVFLAL GASLILFLLL YIIIKRADRL LAERIQEKER LERELLQNEK LASMGRMVAS IAHEIRNPLG IIRSSSEMLY KKALRDNSQN ARLLHAVFQE SKRLSQTVHE FLDYARPKQP AMREVDCSQI LQRALAFLEQ ECAAHEIQVT TALPETLPSQ GDDDLLYRAF YNIISNALQS MDGGGELDIS GGREEDQIWI CIRDTGPGFD ATMLDKYLEP FYTTKDQGTG LGLAIVKNIV DSHGGSLNIT NTETGAEVCI RLQAG
|
| |