| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0054 |
|---|
| Symbol | |
|---|
| ID | 8417857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 69042 |
|---|
| End bp | 70058 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645036618 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003196934 |
|---|
| Protein GI | 258404192 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTT CCGATACCTC CCGGGTTCAT CTCCGTCACG GGGTGAAGAC CGGTCTGGCC
GCGACGTTGG CCTATCTGGC GACCCTCGTT CTCGGACTCA AGTTCGGTTA CTGGGCCGTT
CTCTCCACGG TCATCGTCAT GCAGATGAAT GTGGCCGACT CCATCCGCAT GTGCCGTTAC
CGTTTTTTCG GCACCGCCCT TGGCGCCGTG CTCGGTATCG GTGCTATTCT CGTTTTTCCA
GTCCAGCCCT TTTGGACCGC GATGGCGGTG TTCATCACCA CCGGCTTCTG CGCTTACATG
ACCCGGTACG ACGTGCGCTA CCGTATGGCT GCAATTACGG TCTGCATCGT GGTCCTGGCC
AGTATCGGGG AGCCGAACCG GGTTGTGTTC AGCCTGTATC GGGTCTTGGA AATCGGCATC
GGGGTCTTCT GCGCTTTTGC GGTCACGGTG TTGGTCTGGC CGCGGCGGGC GGGACAGGAT
CTGCGCCGGC GGCTGAACGC CCAGTTCGAG GTCGCGGCGC GGGAGGTGCA GCTTTTGACG
CACACGTTTG TCAGCGGAGG ATCACTCCCT GGTACCAACC GGATTGAGGC CCTGGAGAGC
GAAGCTGCTG AGTTGCGGGA ACTGCTGGAC AAGGTCATGC GTCACGAGCG GCGGCTGTAC
AATGAAGACA CGGCCCGGCT GAACCGCAAC GTGTCGACCC TGTCACGCTG CGCCGAGAAT
CTGCGATCCA TGCATACGAT TTTGCGGGCC GAGCCAGGAG CGCCGCCGGA CATCATGCAG
GATGAACTCC GCGAGCTTGC CGCTGCTGCC GGGGCAGTGG TCGAAGCGCG GCACAACGTG
CCCCCGGAAG ACCTGCGCCG TCTGGAGCGA GCCATCGCTG CCGCTGAGCA ACAGATGCAT
CTCCTGCGCG GCCAAGGCGC CACCCGGACG TATTATCTCG AAGAGGTCCT GCGCTTTTTT
TCCTTTTATT ATGCTTTGAT GCGATTCGGA AAAGACGGGC TGGATTGCAG ACATTAA
|
|---|
| Protein sequence | MDFSDTSRVH LRHGVKTGLA ATLAYLATLV LGLKFGYWAV LSTVIVMQMN VADSIRMCRY
RFFGTALGAV LGIGAILVFP VQPFWTAMAV FITTGFCAYM TRYDVRYRMA AITVCIVVLA
SIGEPNRVVF SLYRVLEIGI GVFCAFAVTV LVWPRRAGQD LRRRLNAQFE VAAREVQLLT
HTFVSGGSLP GTNRIEALES EAAELRELLD KVMRHERRLY NEDTARLNRN VSTLSRCAEN
LRSMHTILRA EPGAPPDIMQ DELRELAAAA GAVVEARHNV PPEDLRRLER AIAAAEQQMH
LLRGQGATRT YYLEEVLRFF SFYYALMRFG KDGLDCRH
|
|---|
| |