| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0035 |
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| Symbol | |
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| ID | 8417837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 39394 |
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| End bp | 42723 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036598 |
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| Product | trehalose synthase |
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| Protein accession | YP_003196915 |
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| Protein GI | 258404173 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTGC AGAAGATGAT CCCCGTGACC CAGGACCCCC AATGGTACAA AGACGCCGTG
ATTTATGAAG TGCCGGTGAA GTCCTTTTGT GACAGCAACG GGGACGGCAT TGGCGATTTC
CGGGGGCTTT TGCATAAACT GGATTACCTC GAGCGCCTGG GGGTGACGGC GTTGTGGCTG
TTGCCGTTTT ATCCTTCCCC GCTCAAGGAT GACGGATACG ATATCGCGGA GTATTTTTCC
GTGCACAAGG ATTACGGTCA GCTACAAGAT TTCAAAGCCT TTTTGCGTGA AGCCCATCAA
CGGGGATTGA AGGTCATCAC TGAATTGGTC ATTAATCACA CATCCAGCGA TCACCTGTGG
TTCAAGAAAT CCCGCCAAGC CGAACCCGGC AGCTATTGGC GCGATTTTTA CGTCTGGAGC
GACACGCCCA ATCGGTACGA AGACGCGCGG ATCATCTTCA AGGATTTTGA ACAATCGAAC
TGGACCTGGG ACCCTGTAGC TGGCGCCTAT TATTGGCACC GGTTCTATTC GCATCAGCCG
GACCTCAATT TCGACAACCC TGAAGTCCAA AAGGCGGTCT TCGAGGCCCT GGATTTCTGG
CTGGATATGG GCGTCGACGG TCTGCGGCTG GACGCGATCC CCTATCTCTA CGAACGTGAG
GGGACGAATT GCGAGAATCT TCCGGAAACC CACGCGTTTT TGAAAAAGCT CCGGGCCCAT
GTCGATGCCA GACATCGGAA CAAGATGCTC CTGGCTGAGG CCAACCAATG GCCGGAAGAT
GCGGTGGCCT ATTTTGGCGA CGGCGACGAA TGCCACATGT CTTTCCACTT TCCGATCATG
CCGCGCATCT TCATGTCCCT GTGGATGGAA GACCGCTTCC CCTTGATCGA CATGATTGAG
CAGACACCGG AGATTCCGGC CGGGTGCCAG TGGGCGCTGT TTTTGCGCAA CCATGACGAA
CTCACCTTGG AAATGGTCTC TGACGAAGAG CGGGACTATA TGTACCGCGT CTATGCCAGC
GACCCCCGGG CACGGATCAA TCTGGGCATT CGGCGGCGAC TGGCCCCGTT GATGCACAAC
AACCGGCGCA AACTGGAACT TTTGACCCTG CTCCTGCTCT CCCTGCCGGG CACGCCGGTG
CTCTATTATG GCGACGAGAT CGGCATGGGC GACAATTTTT TCCTCGGCGA TCGCAACGGG
GTCCGGACGC CCATGCAGTG GACGCCGGAC CGCAACGCCG GGTTCTCTAC GGCCAATCCC
CAGCAGTTGT ATTTGCCGGT TATCCACGAC CCCGAATACC ATTTTCAGTC CATCAACGTC
GAAAACCAGG AAAAAAACCC CTCCTCCCTG TTGTGGTGGA TGCGGCGGGT CATCGCCATG
CGGCGGCGTT TCCGGGCCTT TAGCCGTGGT GCAATCGATT TTCTCCTGCC GGACAATGAA
AAGGTCCTGA CCTTCATTCG CAGCTACGGC GAGGAGCACA TCCTTGTCGT GGTCAACCTC
TCCCGGTTTT CGCAATCGGT ACGCCTGGAC CTCTCGGAAT ACGCGGGCCG GGTGCCGGAA
GAACTCTTCA GCGGCAACCG GTTCCCGGAG ATCGGCGAGG ACCCCTATCC ATTGACCTTG
GGATTCAACG ACTATTTCTG GTTCGTGCTG CGCGAGCCGC AATCCCGACT GCAGACACCG
CAGGGGCCGC CGCGCCTGGA GATGGACACC GACTGGAAGC ACCTGCTGCA CGGGACCTTC
CGTGAGTATC TGGAGATGGA AGTGCTGCCG CGGTTTTTGC GTCAGAGCCG CTGGTTCGGT
TCCAAGGCCA AAACCATGCG CCATCTGCAG GTCGTGGAAG ACGTGAACAT GGGCCACAAC
GGGGAGAAGA CCCATCTGCT CGTTGTGCGG GTCGACTATA CCGAAGGAGG GATGGAACAC
TATCTCCTGC CCTTGTCCTA TACGGACCGG GCCGAGGCGG AATCCCTGCT GCAGGAACAT
CCCCAGGCGG TGATCGCCTA TCTTGAGCTT CAGGACAGCA GCGGCGTCCT CTATGATGGG
CTTTTCAGCG CCAGCTTCCG CACCGTGCTT TTGGAGATGA TCCTCGGACA GCGCAAAAAG
AGCGGTCCCG GCGGCGAGGT CCACGGTGTG CGGGGGCGTT GTCTGAAATC CCTGATCAAG
GACGGCCACC ATATCCCCGC TTCTCGAGTT TTGGCCGCGG AGCAGAGCAA CAGTTCCATC
CTCTATGGCC AGTCGGTGAT CCTCAAGTTG TACCGCCGTC TGGAGCAGGG CACGAATCCG
GACGCGGAGA TCACTCGTCA TCTTGGCCGG TTGCGTCACG GGCCCAAGGT TCCCGGCTTC
GCGGGCCTGC TCGAATACCG CCGGGAGGAC CAGGAACCTG TGACCCTTGG CCTGGCCCAG
CAGTATGTGC CGAGCCGCGG CGATGCCTGG ACCTTTGTCC TATCGGAGTT GGACAGTTTT
TGGGATCGCG TGGCGCGTGA TGAAACGCGC TGGCAGGGCC CGGAACCCGG CTGGCTTCCC
CGGGCCGGCA ATGCCGCGAT GCCGGAGGAA CTGCTGGATC GGGTCGGCCA GGAGTTTTTG
GACAAGATCG AGCTCCTGGG GCGGCGGACC GGAGAACTCC ACCGGGCGCT GACCGATTCG
GACCCGGAAT CTCCCTTCGC CCCCGAACCG TTTTCCAAGC TTTATCAGCG CTCGCTGTAC
CAGTCGGTGC GCTATCAGGT CCGTAAAACG CTGCACAGTG TGCGTCGCCA TCTGGACGAG
CTTCCCGAGG CGATCCGTCC ACAGGCAGAG GCCTTGCTGG TCAATGAGCA TCTGGTGCTC
GAACGCCTGG GCGGACTGAC CGCCCATCGG GTCGAGGCCC AGAAGATTCG CATCCACGGC
GATTACCACC TCGGTCAGGT GCTTTACACC GGCGAGGATT TCTGGATTAT AGACTTTGAG
GGAGAGCCAG CCAGGCCGCT GAGCGAACGG CGGTTGAAGC GGTCTCCACT GCGGGATGTG
GCCGGGATGC TGCGCTCTTT CGACTACGCG GTGCACACCT CGCTCTCGCG GCAAGAGAGC
GGGGTGACCT CAGCAGTCGG CAGGAGTTGG ACCGCCCCCT GGTACGCCGC GGTCTGCCGG
ACGTATCTGC GCGGGTATCT CGACCAGGTT GAAGACGCCG CTTTCGTCCC CAGGGATCCG
GAGGACATCT GGCGTCTGCT CGAAGGATTT TTGATTGAGA AGGCGGTCTA CGAAGTCGGC
TATGAAGCCA ACAACCGTCC CCACTGGATT TGGCTCCCTC TCGGCGGCCT GTTGCGCCTG
CTGGGCAAGG AGCCCGATGT GGACAGTTAA
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| Protein sequence | MALQKMIPVT QDPQWYKDAV IYEVPVKSFC DSNGDGIGDF RGLLHKLDYL ERLGVTALWL
LPFYPSPLKD DGYDIAEYFS VHKDYGQLQD FKAFLREAHQ RGLKVITELV INHTSSDHLW
FKKSRQAEPG SYWRDFYVWS DTPNRYEDAR IIFKDFEQSN WTWDPVAGAY YWHRFYSHQP
DLNFDNPEVQ KAVFEALDFW LDMGVDGLRL DAIPYLYERE GTNCENLPET HAFLKKLRAH
VDARHRNKML LAEANQWPED AVAYFGDGDE CHMSFHFPIM PRIFMSLWME DRFPLIDMIE
QTPEIPAGCQ WALFLRNHDE LTLEMVSDEE RDYMYRVYAS DPRARINLGI RRRLAPLMHN
NRRKLELLTL LLLSLPGTPV LYYGDEIGMG DNFFLGDRNG VRTPMQWTPD RNAGFSTANP
QQLYLPVIHD PEYHFQSINV ENQEKNPSSL LWWMRRVIAM RRRFRAFSRG AIDFLLPDNE
KVLTFIRSYG EEHILVVVNL SRFSQSVRLD LSEYAGRVPE ELFSGNRFPE IGEDPYPLTL
GFNDYFWFVL REPQSRLQTP QGPPRLEMDT DWKHLLHGTF REYLEMEVLP RFLRQSRWFG
SKAKTMRHLQ VVEDVNMGHN GEKTHLLVVR VDYTEGGMEH YLLPLSYTDR AEAESLLQEH
PQAVIAYLEL QDSSGVLYDG LFSASFRTVL LEMILGQRKK SGPGGEVHGV RGRCLKSLIK
DGHHIPASRV LAAEQSNSSI LYGQSVILKL YRRLEQGTNP DAEITRHLGR LRHGPKVPGF
AGLLEYRRED QEPVTLGLAQ QYVPSRGDAW TFVLSELDSF WDRVARDETR WQGPEPGWLP
RAGNAAMPEE LLDRVGQEFL DKIELLGRRT GELHRALTDS DPESPFAPEP FSKLYQRSLY
QSVRYQVRKT LHSVRRHLDE LPEAIRPQAE ALLVNEHLVL ERLGGLTAHR VEAQKIRIHG
DYHLGQVLYT GEDFWIIDFE GEPARPLSER RLKRSPLRDV AGMLRSFDYA VHTSLSRQES
GVTSAVGRSW TAPWYAAVCR TYLRGYLDQV EDAAFVPRDP EDIWRLLEGF LIEKAVYEVG
YEANNRPHWI WLPLGGLLRL LGKEPDVDS
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