| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0033 |
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| Symbol | |
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| ID | 8417835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 35457 |
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| End bp | 36686 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645036596 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003196913 |
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| Protein GI | 258404171 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCATTT CACCCAGCCC AGCGCAGCCG CAATTTACCC GCCTCGTCGG GCCGCTTGTG
CTCATTTCGA CCATTTTTTT TCTCAATTTC ATTTCCCGGG TGGCCCTGGG TCCTGTACTT
TTGCCCCTGC AAGAGGACCT CGGCATCAGC CTCAGCCGCA CCGGCCTCAT TTTTCTGACC
TTGCAGGCCG GCTACAGCGT GGCCTTGCTC AATGCTGGGT GGGTATCCTC CCGATTGACG
CACCGGCGGA CTATTTTGCT TTCGATTTGG GCCATCGGCG CGGGGTGGAT CTGTGTCGGT
CTGAGCCCGA GTTTTCCGGT CATGCTCGCC TGCCTCTTTG CCACCGGTCT GGGCGGCGGC
CTCTATCTCC CCTCCGGCGT GGCCTCGATC ACCGACATCA CCCCGAGCTG CCATTGGGGC
AAAGGGTTCG CCATTCATGA AATGGCCCCG AGCCTGTCCT TCATCCTGGC CCCGCTGCTC
GTCGAGGCCC TGCTCTTTCT GGGGTCCTGG CGCCTGGTGT ATATTGTCCT GGGCCTGTCC
TGCTTCGTGG TCGGGGCCAT TTACCGCAAA CACAGCACCG CCGGGCGGTT TTCCGGACAG
CCGCCGCGGC TCAAAGCCCT GCGGGCCATC CTGACCCGCC CCGCCTTCTG GGCCATGACC
CTGTTTTTCG TCCTTGTCGT GGGCGGAGAG ATCGGGGTCT ACAACCTCGC CCCGGCCTAT
TTGGTCAAAA GCCACGGCAT CCCGAGGGAA TGGGCCAATT TCATCCTTTC GGCCTCCCGG
CTGCTCAGTC TGGGAACCGC TTTTGGGGCC GGTTGGTGTA TCGATAAGCT GGGCCTGAAA
CGTTCCCTGA CCGTGATTCT CAGCGCCGGC GGCCTGGCAA CCATTGGCTT CGCCTGGGGC
AGCAGTCTTT GGGTTGCGGC TATGCTCGTT CTCCAGCCGA TTTTTCTCGT CGCCTATTTC
CCAGCCGGGT TTTCCGCCCT GACCAGCATC TCCGAAGACA AGCAAAACGA TCTGACCGTG
TCCTTGACCG TGACCAGCGC CTCTTTGCTC GGCGCAGGCG GCATCCCAGC CCTGTTGGCC
TACCTGGGCG AACACGTCTC TTTTAGTCTC GGCTTCACCG GCCTGGGGGT CTGCCTCGCG
GCCAGTGCCC TGCTTGTCCC CTTTCTCGAT TTCCGCAATG CCGCGGCGGT GCAGGAAGGA
CAGGAATGCC GTCACACGGA GGGGGGCTGA
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| Protein sequence | MSISPSPAQP QFTRLVGPLV LISTIFFLNF ISRVALGPVL LPLQEDLGIS LSRTGLIFLT
LQAGYSVALL NAGWVSSRLT HRRTILLSIW AIGAGWICVG LSPSFPVMLA CLFATGLGGG
LYLPSGVASI TDITPSCHWG KGFAIHEMAP SLSFILAPLL VEALLFLGSW RLVYIVLGLS
CFVVGAIYRK HSTAGRFSGQ PPRLKALRAI LTRPAFWAMT LFFVLVVGGE IGVYNLAPAY
LVKSHGIPRE WANFILSASR LLSLGTAFGA GWCIDKLGLK RSLTVILSAG GLATIGFAWG
SSLWVAAMLV LQPIFLVAYF PAGFSALTSI SEDKQNDLTV SLTVTSASLL GAGGIPALLA
YLGEHVSFSL GFTGLGVCLA ASALLVPFLD FRNAAAVQEG QECRHTEGG
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