| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0023 |
|---|
| Symbol | |
|---|
| ID | 8417825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 25202 |
|---|
| End bp | 25597 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645036586 |
|---|
| Product | protein of unknown function UPF0047 |
|---|
| Protein accession | YP_003196903 |
|---|
| Protein GI | 258404161 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAGA TCACCGTTTC AACCTCCAAG CGTGAAGAAT TTGTCGATAT CACAGAGCAG
GTTCGACGGG TCTGCGGCGA CAAAGGGTGG CAGGACGGGG TAGTACTTCT GCACTGCGCC
CACACCACCG CTGGGCTGAC CGTGAATGAG TCAGCGGATC CCAGCGTCTG CCGCGACATC
TTGGCCCATT TGCGCCAAAG CGTCCCCCAT ATGGCGGGCT ATGAGCACGG CGAGGGCAAT
AGCGATGCCC ATATCAAGTC GTCTTTGATG GGATGCAGCC AACAGGTGTT GGTGGCCAAT
GGCCGTCTGG CCCTGGGCAC CTGGCAGGGC ATCTTTTTTA CCGAGTTCGA CGGGCCCCGC
CAGCGCCGTG TCTGGTTGCA ATGGATTCCG GCCTAG
|
|---|
| Protein sequence | MLEITVSTSK REEFVDITEQ VRRVCGDKGW QDGVVLLHCA HTTAGLTVNE SADPSVCRDI
LAHLRQSVPH MAGYEHGEGN SDAHIKSSLM GCSQQVLVAN GRLALGTWQG IFFTEFDGPR
QRRVWLQWIP A
|
|---|
| |