Gene Dret_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0010 
Symbol 
ID8417812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp10491 
End bp11237 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID645036573 
ProductMethyltransferase type 11 
Protein accessionYP_003196890 
Protein GI258404148 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACT CGGTATGCTG GGGCAAAGAG GAATTGGAGC GGCTGCGGGC CTGGGAGCAC 
AGCTTTCCCG GTCGCTACGC TCTGGGTATG GAACGCTCGC TCTTGTTCCG GCTCATGTCG
GGCTGGCCGC GCCGGCGCCA ACGGTTGCTT GAAGTCGGCT GCGGCACCGG CTTCTTCCTG
GAAGCGGCCT GGGAGTCAGG ATTTTCTGTC TCCGGGCTGG ACAGGTCGCC CCTTATGCTC
CAGGCGACCC GGGAGCGGCT TGGCCCGCGG GCGGATCTCC ATCTGGGAAC GGCAGAAGAC
CTCCCGTTTT GGGACAACGA TTTCGATTTC GTTTTGGTGT TGACGGTGCT GGAATGCGTT
TCCAATCCCC AGGCCGTCCT TGCCGAAGCT TGCCGGGTGG CCCGCAAAGG GGTGGTAGTC
AGTTTTCTCA ACCCCTTTTC CGTCTATTAC CTGACACACG GCTTGCCCTG GCCCGGAGTG
CGGAACAGTC TGCTCCGCAG GGCGAAGTGG CTGAGCTGGC CCAGGTTGCG GTGCATGATT
TTTCAGGAGG CCGGCCCGAG ACCAATGACC TGCCGTTCCG TGTTGCCGGG GCCAATGGTC
TCCTGGCGGA ACAACAGAGT CTGCAATACG TTGAATGCCC GGATTTATCC CCCGAATATC
GGCGCGTACC AGGGGGTTCG CATCGATCTG GTCGGCCAGC CAGTGGGTAC GCCACTTCTC
GGCTGGACCC ATCAGCCTGC GGCTTGA
 
Protein sequence
MADSVCWGKE ELERLRAWEH SFPGRYALGM ERSLLFRLMS GWPRRRQRLL EVGCGTGFFL 
EAAWESGFSV SGLDRSPLML QATRERLGPR ADLHLGTAED LPFWDNDFDF VLVLTVLECV
SNPQAVLAEA CRVARKGVVV SFLNPFSVYY LTHGLPWPGV RNSLLRRAKW LSWPRLRCMI
FQEAGPRPMT CRSVLPGPMV SWRNNRVCNT LNARIYPPNI GAYQGVRIDL VGQPVGTPLL
GWTHQPAA