| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_4348 |
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| Symbol | |
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| ID | 8431367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 4525506 |
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| End bp | 4526390 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645036541 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_003193634 |
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| Protein GI | 258517412 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000379019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAA CAGGCACCTG GACACTTAAA AAGGGTTTAG CAGAAATGCT TAAAGGTGGC
GTAATAATGG ATGTTACTAC GCCAGAACAA GCTAAAATAG CTGAAGAAGC CGGAGCTTGT
GCGGTTATGG CGTTGGAAAG AGTACCTGCA GATATAAGAG CGGCAGGTGG AGTGGCCAGA
ATGGCTGATC CCACTATCGT TATCAGAATT ATGGAAGTTG TTAGCATTCC GGTAATGGCT
AAAGCCAGAA TAGGTCATTT TGTTGAAGCG CAGATCCTTG AGTCTTTGGG CGTTGATTAC
ATAGATGAGA GCGAAGTATT GACTCCGGCT GATGAGCAGT TTCATATTGA TAAAAATGCT
TTCAAGGTTC CTTTTGTCTG CGGAGCCAGA AATTTAGGCG AGGCTTTGCG AAGAATCGGT
GAAGGCGCGG CTATGATTCG GACCAAAGGT GAACCAGGTA CCGGTAATGT TGTGGAAGCG
GTAAGACACA TGCGCAAGGT TATGGGAGAA ATTCGTAAAC TTCAGAATAT GCCTAAAGAA
GAATTGATGA CAATAGCTAA AGAAATCGGC GCGCCCTATG AGCTGTTGCT GCAGGTAGCT
GAACAGGGGA AACTCCCGGT AGTCAATTTT GCTGCGGGTG GTATTGCCAC GCCGGCAGAC
GCTGCTTTGA TGATGCAATT AGGGTGTGAC GGGATTTTTG TTGGTTCGGG TATTTTTAAA
TCCGATAACC CGGCTGTCAG GGCCAAAGCC ATTGTAGCGG CTACTACACA TTACAATGAT
CCGAAAATAC TGGCCGATAT ATCCAGAGAT CTGGGTGAAG CAATGCCTGG TTTGGAGATA
TCTTCAATTA CTCCTGAGCA GAGGATGCAG GATCGGGGCT GGTAA
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| Protein sequence | MTETGTWTLK KGLAEMLKGG VIMDVTTPEQ AKIAEEAGAC AVMALERVPA DIRAAGGVAR
MADPTIVIRI MEVVSIPVMA KARIGHFVEA QILESLGVDY IDESEVLTPA DEQFHIDKNA
FKVPFVCGAR NLGEALRRIG EGAAMIRTKG EPGTGNVVEA VRHMRKVMGE IRKLQNMPKE
ELMTIAKEIG APYELLLQVA EQGKLPVVNF AAGGIATPAD AALMMQLGCD GIFVGSGIFK
SDNPAVRAKA IVAATTHYND PKILADISRD LGEAMPGLEI SSITPEQRMQ DRGW
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