Gene Dtox_4306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4306 
Symbol 
ID8431321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4471783 
End bp4472757 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content46% 
IMG OID645036497 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_003193594 
Protein GI258517372 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0064009 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATTT TGGTATGCGG CGGTGCCGGT TATATAGGCA GTCATGTGGT GCGGCAGCTT 
CAGAAAAAGG GTTATGAGGT GCTGGTATTA GATAATTTGA TTAATGGGCA CTTATCTGCC
GTTGACGGGG TACCCTTTGT AAAGGCGGAT ATTACAGATA AGCAGGCTTT ACAGGAGGTC
TTTAGCCGGA ATTCCATCGA TGCGGTCATG CATTTTGCGG CTTTTAGTAT TGTTGGTGAA
TCAATGAGCA AACCTGGGTT GTACTACCGC AATAATGTTT TAGGAACGCT GAATTTGCTG
GAAGCCATGC GGGAGAATAA GGTCAGTAAG TTAATCTTTT CATCTACTGC TGCAGTTTAT
GGTGAGCCGG AAGAAATCCC GATTTGTGAA GAACATCGTA CGAAGCCGAC CAATCCTTAC
GGGGCAACTA AACTGGCGGT GGAAGAGATG TTAAATTGGT TTAACCATGC TTATGGACTA
AACTATGTCT CACTGCGTTA CTTTAATGCG GCCGGGGCGG ATGAATCCGG TGATATAGGC
GAAGATCACA ACCCGGAAAC ACACCTGATA CCATTGGTGT TAAAAACTGC TCTGGGAGTT
TTGCCGGAAA TAAAGATTTT TGGTACAGAC TATCCTACTC CGGACGGGAC CTGTCTTCGC
GATTATATCC ATGTGAATGA TTTGGCCGAT GCCCATATTA TGGGTTTGCA AAGTCTGTCC
GGCGGGGGAC AATCAACAAT ATTTAATCTG GGCAATGGCA ACGGCTTCTC TGTCAAAGAA
ATCATTGAAA CCGCCCGAAA AGTTACCGGT AAACCTATTC AGGCGGTGGA AACCGATCGC
CGCACGGGCG ACCCGGCTGT TCTGGTGGCC TCTTCTGAAA AAATAAAACA GGAACTGGGC
TGGCAGCCCC GGTATGGGGA TATAGAGCAA ATTATTTCAT CAGCCTGGCG CTGGCATCAA
AGAAATTTTA ACTGA
 
Protein sequence
MNILVCGGAG YIGSHVVRQL QKKGYEVLVL DNLINGHLSA VDGVPFVKAD ITDKQALQEV 
FSRNSIDAVM HFAAFSIVGE SMSKPGLYYR NNVLGTLNLL EAMRENKVSK LIFSSTAAVY
GEPEEIPICE EHRTKPTNPY GATKLAVEEM LNWFNHAYGL NYVSLRYFNA AGADESGDIG
EDHNPETHLI PLVLKTALGV LPEIKIFGTD YPTPDGTCLR DYIHVNDLAD AHIMGLQSLS
GGGQSTIFNL GNGNGFSVKE IIETARKVTG KPIQAVETDR RTGDPAVLVA SSEKIKQELG
WQPRYGDIEQ IISSAWRWHQ RNFN