| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_4176 |
|---|
| Symbol | |
|---|
| ID | 8431190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 4353485 |
|---|
| End bp | 4353949 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 645036369 |
|---|
| Product | ComE operon protein 2 |
|---|
| Protein accession | YP_003193467 |
|---|
| Protein GI | 258517245 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2131] Deoxycytidylate deaminase |
|---|
| TIGRFAM ID | [TIGR02571] ComE operon protein 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000229271 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA TTTCCTGGCA CGAGTACTTT ATGGGCCAGG CTAAAATAAT AGCTCTGCGT
TCCTCCTGCT CCAGGCTTTC TGTAGGATGC CTGATCGTAA GAGACAGGAG ATCAATTGCC
GGCGGGTACA ACGGTTCGGT TTCCGGAGAT GTGCATTGCC TGGACGACGG CTGCCGCATA
GATAACGGGC ACTGCGTCCG CTGCGTGCAC GCCGAGGCTA ACGCCATAGT ACAGTGTGCA
AAATTCGGCG CTTCGACGGA AGGCACTGAT ATATATGTAA CCCATTTCCC TTGTTTAAAT
TGTGCCAAAC TGATCATTCA GGCAGGTATA AGGCATGTCT ACTACGAACA GGATTACCGG
ATCGATCCGT ATTGTATGGA GCTTTTTAAT CTGGTTGGAG TTAAGGTGAC TAAAATCACC
TGTAACTTGT CTGATTACCT GAAGTTAACT GACAGTAATT TGTAA
|
|---|
| Protein sequence | MKRISWHEYF MGQAKIIALR SSCSRLSVGC LIVRDRRSIA GGYNGSVSGD VHCLDDGCRI
DNGHCVRCVH AEANAIVQCA KFGASTEGTD IYVTHFPCLN CAKLIIQAGI RHVYYEQDYR
IDPYCMELFN LVGVKVTKIT CNLSDYLKLT DSNL
|
|---|
| |