Gene Dtox_4139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4139 
Symbol 
ID8431153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4310942 
End bp4311490 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content37% 
IMG OID645036332 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_003193430 
Protein GI258517208 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000190407 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTAAAT TTAATTTTAT TAACACAGGT ATACAAGGTC TCTATATCAT TGAACCAATG 
ATTTTTGGCG ATCATAGGGG ATATTTTATG GAAACCTATC ATTTGAAGGA ATTTTCTGAA
GCCGGACTTA ATATGGCCTT TGTACAGGAT AACCAGTCCA AGTCTAAAAA AGGTGTACTC
AGAGGACTGC ATTTCCAGCG CAAATATCCC CAGGGTAAGT TAGTTAGAGT TATTAAGGGG
GAAGTCTTTG ATGTTGCGGT GGATTTAAGA ATGGACTCAA AGACTTATGG CAAATGGTTC
GGGGTAATTC TTTCGGAAGA AAATAAAAAA CAGTTTTATA TACCTGAAAG TTTTGCTCAT
GGTTTTCTCG TACTCTCAGA TGAAGCTGAA TTTGTATACA AATGTACGGA TTATTATCAT
CCTGAGGATG AAGACGGTAT ACTGTGGAAC GACCCCGCAA TAGGAATTGC ATGGCCATTG
GACAGAATAG ATGATATTAT TCTTTCGGAA AAGGACCAAA AATGGAAAGG TTTAAAGGAT
ACTCATTAG
 
Protein sequence
MGKFNFINTG IQGLYIIEPM IFGDHRGYFM ETYHLKEFSE AGLNMAFVQD NQSKSKKGVL 
RGLHFQRKYP QGKLVRVIKG EVFDVAVDLR MDSKTYGKWF GVILSEENKK QFYIPESFAH
GFLVLSDEAE FVYKCTDYYH PEDEDGILWN DPAIGIAWPL DRIDDIILSE KDQKWKGLKD
TH