| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3935 |
|---|
| Symbol | |
|---|
| ID | 8430950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 4109757 |
|---|
| End bp | 4110512 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 645036153 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_003193251 |
|---|
| Protein GI | 258517029 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00010757 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.914781 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAGC CTATAATTGC AGCTAATTGG AAAATGCATA AAACAGTTGC TGAAGCAGTG
GATTTTTGTG TTAAACTAAG AGAAACAGTT TTAACGGTTA GTGGTGTGGA GGTTTTGGTA
TGTCCTCCTT TTACTGCTCT GTCTCCCGTC TCCGCTGTTA TTAAGGATAG TGAGATTAAG
CTGGGTGCCC AGAATATGCA CTGGGAAGAA CAGGGTGCCT TTACCGGGGA AGTTTCTCCT
CTTATGTTGA AGGAGGCAGG CTGTGATTAT GTTATTCTCG GCCACTCTGA AAGAAGACAG
TTTTTTGGTG AAACTGATGA GGTAATAAAT AAAAAAGCCA GGGCTGCTTT TGCACATGAC
TTGCTTCCGA TAATCTGTGT CGGTGAGCGT TTGGAGCAGC GTGAAGCGGG TGAAACAGAA
GCTGTGGTAA CAGCCCAGGT TAATAACTCT CTAAGCGGTT TAACCGCGGC GCAGGTGGAT
AAACTTGTAA TAGCCTATGA GCCTGTCTGG GCTATCGGTA CAGGTAAAAC AGCATCTGAT
GAAGATGCTC AGTCCGTGAT TAAGCTTATC CGCAGTTTAG TGGCTGAACA GTTTAACCCG
GCTTCCGCCG AAAAGTTGAG AATTCAATAC GGCGGCAGTG TTAAACCGGG CAATACCGCG
GGTTTAATGG CGCAAGCCGA TATAGACGGA GCTCTGGTGG GTGGAGCCAG TTTGGATTTA
GAGAGCTTTT GGGGTATCGT TAAAGCTGTA AAATAA
|
|---|
| Protein sequence | MRKPIIAANW KMHKTVAEAV DFCVKLRETV LTVSGVEVLV CPPFTALSPV SAVIKDSEIK
LGAQNMHWEE QGAFTGEVSP LMLKEAGCDY VILGHSERRQ FFGETDEVIN KKARAAFAHD
LLPIICVGER LEQREAGETE AVVTAQVNNS LSGLTAAQVD KLVIAYEPVW AIGTGKTASD
EDAQSVIKLI RSLVAEQFNP ASAEKLRIQY GGSVKPGNTA GLMAQADIDG ALVGGASLDL
ESFWGIVKAV K
|
|---|
| |