Gene Dtox_3898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3898 
Symbol 
ID8430912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4070509 
End bp4071159 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content38% 
IMG OID645036116 
Productthymidylate synthase, flavin-dependent 
Protein accessionYP_003193215 
Protein GI258516993 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1351] Predicted alternative thymidylate synthase 
TIGRFAM ID[TIGR02170] thymidylate synthase, flavin-dependent 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.262304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAT TACTGATAGA GTACACATCA CCACTTGCCG TTATAAAAGC TACAGCAATG 
CCTTATCAAA GCAAAGAAAG TATAGATGTT GTAAGCCGTG TATGGAACAG TGGTCACAGA
AGTATTGCCA GACACGGCAT GGCTTCTTTT CTTGTGGAAG GTGTTAGTCA AAGCTTACTC
AGACAATTAA GCCGTCATCC TCATATTAAT TTGACCGTTA AATCATCACG TTTCTGTAAT
ATGGATGAAG TTAATAATGC TGTACCACCG TTTATTAGCT TGACTGACCG TTTTGAGTAT
AACGATGACT ATGAAACAAT AATGAAAATA TATCATAAGT GGTCAGAAAA AGACGGTTAC
AATAACCGTG AACAGAGGAA CGAACTGGCA AAGCTAATGT TACCGTTAGG AAGTACCACA
GACCTTGTAT TATCCGGCAA TTATCAAGCT TTGTACGAAT TCCTACAGCT AAGACTCTGT
GAAAGAGCGG AGTGGGAGAT TAGACAACTG GCCAATAGAT TAAAATATAT ACTGTCAGAA
ATTATGCCGG TTATATTTAA GGAATTGAAC TGTAAGGGTA ATGAATTAGG CTATTGTCCA
GAAATTCACG GTTCATGTGG TAAACACATG GTAAAACAGA AAGTGGGTTA G
 
Protein sequence
MKVLLIEYTS PLAVIKATAM PYQSKESIDV VSRVWNSGHR SIARHGMASF LVEGVSQSLL 
RQLSRHPHIN LTVKSSRFCN MDEVNNAVPP FISLTDRFEY NDDYETIMKI YHKWSEKDGY
NNREQRNELA KLMLPLGSTT DLVLSGNYQA LYEFLQLRLC ERAEWEIRQL ANRLKYILSE
IMPVIFKELN CKGNELGYCP EIHGSCGKHM VKQKVG