Gene Dtox_3854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3854 
Symbol 
ID8430868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4040419 
End bp4040937 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content33% 
IMG OID645036082 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003193181 
Protein GI258516959 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTATA TCTCGGTACC AAATAGAAAA CCTATACCTG ATATAAATAA TCTCATAGAA 
AAATATGGCA ACTCACTGCT TAGAATGTGC CTTATTTACC TTAAAGATTC ACATTTAGCA
GAAGATGCTG TACAAGATAC TTTCATTAAG ATACATAAAA GCTATCCAAA GTTTAGAGGT
GACAGTAAGG AAAGAACATG GATAATGAGA ATAGCAATCA ATGTTTGCAA AAATTACTTG
CGCTCTTCCT GGTGGAAACG CATTGATGAA ACAATGGTTT TAGAAAATAT GCCTTCAAAT
AACAGCAATG ATGCTTTGCA AGATGAGGCG CTCCTTTTAG AAATAATGAA GTTATCTTCT
AAATACAAGG AAGTGATACT TCTGTTCTAC TATCAAGATA TGAAAATCCG CGAAATTGCA
GAGGTGTTGA AAACACCGGA GGCAACTATA TCTATTAGGT TGAAGAGAGC AAGAGAAATA
TTAAAAATAA ATTTGAAAGG ATGGTATTAT GATGAATAG
 
Protein sequence
MGYISVPNRK PIPDINNLIE KYGNSLLRMC LIYLKDSHLA EDAVQDTFIK IHKSYPKFRG 
DSKERTWIMR IAINVCKNYL RSSWWKRIDE TMVLENMPSN NSNDALQDEA LLLEIMKLSS
KYKEVILLFY YQDMKIREIA EVLKTPEATI SIRLKRAREI LKINLKGWYY DE