Gene Dtox_3830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3830 
Symbol 
ID8430844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4014959 
End bp4016992 
Gene Length2034 bp 
Protein Length677 aa 
Translation table11 
GC content50% 
IMG OID645036058 
ProductRespiratory-chain NADH dehydrogenase domain 51 kDa subunit 
Protein accessionYP_003193157 
Protein GI258516935 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGT CCATTGAGGA ACTCAAAGCA ATTAAAGATA AATACCTGCC TGTTATCAAT 
TTGCGCTTAG ATCACAGACC GGCTTCGGAA CAAAGACATC TGCTGGTTTG TGCCGGTACC
GCCTGTACTT CGTCAGCCAG TCAAGAGATC ATCAAAGAAC TTGACCGACA GATCAAGGAA
CATAAGTTAA CCGGTAAAGC AAAAGTTTTT AAAACAGGTT GTTTCGGGTT TTGCCAGCAA
GGACCAATTG TTGTGGTGCA GCCTGATAAT ATTTTTTATT GCCGGGTTAA GAAAGAGAAT
GTCAAGGATC TGGTGGAAAA GCATATAATC GGCGGCCGGG TGCTTGAGGA ACTGCTGTTT
AAAGAGCCTG ATTCGGGAGA ACTGCAGCGG CGTATGGAGG ACATAAGGTT TTTTCACAAC
CAGCAGCGGG TGGTACTGCG CAATTGCGGT GTAATCAACC CGGAAGATAT TAATGAGTAC
ATAGCCAGGG ACGGTTATGC CGCTTTAGCC GATATACTTA ATCATCGTTC GCGGGCTGAG
GTTATTGATC AAGTAATTAA TTCTGTTCTT CGTGGCCGGG GAGGTGGGGG GTTCCCTACA
GGCAAAAAAT GGCAAATAGC TGCCCGGCAG GAAGTAAACC CTAAATATAT AGTATGCAAT
GCTGATGAGG GGGATCCGGG CGCGTTTATG GATCGCAGTA TTTTAGAAGG AGATCCTCAT
GCCATACTGG AGGGTATGTC TATCGGCGCT TACGCTGTAG GTGCCGAGCA GGGTTATATC
TATGTGCGCG CAGAGTATCC TATCGCGGTG GACAGGCTGG AAATAGCTAT TGGGCAGGCC
AGGCAAATGG GCTTACTGGG TAAAAACATT TTGGGCAGCG GTTTTAACTT TGATATTGAT
ATAAAACTGG GCGCCGGGGC TTTCGTCTGC GGTGAGGAAA CCGCGCTGCT GCATTCATGC
ATGGGGGCCA GGGGAGAACC CAGACCCCGA CCGCCCTACC CCGCTCAGGA GGGGCTTTGG
GGAAAGCCTA CTGTAATTAA CAATGTCGAG ACTTTTGCCA ACGTGACGGT TGTTTTTCAG
AAGGGTTGGC AGTGGTTTGT GGGGCGGGGT ACTGCCAAAA GCAGCGGAAC CAAGGTATTT
TCTCTGGCCG GCAAGATTAA AAATACCGGT CTAATTGAGG TGCCCATGGG CTCCACTTTA
CGCTCTATTA TTTTCGATAC CGGAGGTGGT ATACCTGACG GCCACAGGTA CAAGGCTGTC
CAGACAGGCG GGCCTTCCGG CGGGTGTATT CCGGAGGAAT ACCTGGATAT CCTGGTAGAT
TATGACTCTC TGGCGAAAGT TGGTTCAATT ATGGGTTCCG GCGGGCTAAT TGTTATGGAT
GACCGCGACT GTATGGTGGA TATAGCCCGT TTCTATGTTG AATTTGCTCA GGATGAATCT
TGCGGGCGTT GTACCCCTTG CCGTGTAGGT ACGAAAAGAC TGCTGGAAAT CTTGCAGCGC
ATAACCAAAG GTGAAGGTGA GATGGAGGAT TTAAGGCTGC TGGAGGAACT TTCTCAGGAT
ATTAAGGTTG CCTCCCTCTG CGGGTTAGGC CAGACCGCTC CTAATCCGGT GCTCTCCACA
CTGCGTTTTT TCCGGGATGA GTATATCGCT CATATTAGGG ATAAGCACTG CCCGGCCGGT
GTATGTAAAG ACTTGCTGCA TTATCTGGTG CTGGAGGACC AGTGCATTGC CTGCGGTATA
TGCGCTAAAG CCTGCCCGGT TGATGCGATA AGCGGGGAGA GGAAAAAACC GCCCTATAAA
ATTGATCCGG AGAAATGTAT CCGCTGCGGC GCCTGCATGG AGAAGTGTCC CAAAGATGTT
ATTATCAGGG GCAGCATTCC CGGATTTAAA GCTGCTGCAG GTCAAGTTCC CGGGGGCGGC
AGGGGTGGTA TAAACGAAGA AGGCAACCTG GAGAATTCAG ACTTTGCGGG GATACGGGAA
AGGGGGGATA AGCATGCCGC AGGTTCAGGA GTACACGCCG GGTCCGGTCA TTGA
 
Protein sequence
MIKSIEELKA IKDKYLPVIN LRLDHRPASE QRHLLVCAGT ACTSSASQEI IKELDRQIKE 
HKLTGKAKVF KTGCFGFCQQ GPIVVVQPDN IFYCRVKKEN VKDLVEKHII GGRVLEELLF
KEPDSGELQR RMEDIRFFHN QQRVVLRNCG VINPEDINEY IARDGYAALA DILNHRSRAE
VIDQVINSVL RGRGGGGFPT GKKWQIAARQ EVNPKYIVCN ADEGDPGAFM DRSILEGDPH
AILEGMSIGA YAVGAEQGYI YVRAEYPIAV DRLEIAIGQA RQMGLLGKNI LGSGFNFDID
IKLGAGAFVC GEETALLHSC MGARGEPRPR PPYPAQEGLW GKPTVINNVE TFANVTVVFQ
KGWQWFVGRG TAKSSGTKVF SLAGKIKNTG LIEVPMGSTL RSIIFDTGGG IPDGHRYKAV
QTGGPSGGCI PEEYLDILVD YDSLAKVGSI MGSGGLIVMD DRDCMVDIAR FYVEFAQDES
CGRCTPCRVG TKRLLEILQR ITKGEGEMED LRLLEELSQD IKVASLCGLG QTAPNPVLST
LRFFRDEYIA HIRDKHCPAG VCKDLLHYLV LEDQCIACGI CAKACPVDAI SGERKKPPYK
IDPEKCIRCG ACMEKCPKDV IIRGSIPGFK AAAGQVPGGG RGGINEEGNL ENSDFAGIRE
RGDKHAAGSG VHAGSGH