Gene Dtox_3810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3810 
Symbol 
ID8430820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3985408 
End bp3988143 
Gene Length2736 bp 
Protein Length911 aa 
Translation table11 
GC content35% 
IMG OID645036035 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_003193138 
Protein GI258516916 
COG category[R] General function prediction only 
COG ID[COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATT TTTCATATGC CAAATATAGT CCTATATGGT TCATTATGAA CAGGGGTGAT 
AACATCAATA GTTTTTTTGA GATACGACAA TGGGAACTGG TCGATACAAT TCTCTTAGAA
TCAAGGGAGA AGTGTTTAGA ACCAATTGAT GACCTACCAC TATCCAATAC AACACTAAAT
TATATTAAAA CATTTGTTCC AGGAATATAT TTGCACCAAA AAGAAGCTCT TAAATATTCC
ATAGGTGGAT ATAATGTTTG TTTGGTTACA GGTACTGCAT CGGGTAAAAG TTTGGCATTT
TATGCTTTAG GTATTGAGAA ATTAGTTGCA AAACCTAGTG CAAAAATAAT TGCCATTTAC
CCATTAAAAG CATTAGGACG TGAACAAGAA AAACGTTGGA AGAATGCACT TGATGCAGCC
GGAATAAATG CTAAAGTTGG ACGTATTGAT GGTGATGTAA AATCAATGGC TAGGAGAAAG
GCTATTCTTA AAGATTGTCA GGTTGTAATT ATGACTCCTG ATATAATTCA TCATTGGCTT
TTGTTGAATA TTTCCGACAG GGAAATTGTA AAATTTTTAA CTAATGTTGC CCTTTTTGTT
GTAGATGAAG TACATACATA TACCGGAGTT TTTGGTTCAA ATGCTGCTTT TTTATTCCGG
CGCTTAAGGC ATCTTATAGC TTTTACCAAT AACACTCCCC AATTTATTTG TGCTTCAGCA
ACTATGGCAT CTCCTGAAAA ACATCTGGAA AACCTTTTTG GCGTCCCTTT TCATATTATT
GGTTCTGAAC TTGATACATC TCCCAGACAG GAAGTCAAAA TTGTGTTTTT AAGACCTCAT
TTAAAAGGAG ATTATCTTAC TGAGATTACT TATTTTCTTA AAGAGCTTAC TTCTATTGAA
AGACGGTTTA TAGCTTTTGT TGATAGTAGG AAATCAGCGG AATTAATAAC ATCAATTTTA
TCAAGAGGTC ATCAGGGACG TGAACAAGGC GCAAATATTG AAGTTGAAAG TGATAAGATT
ACAGGAATTA TAAAACCAGA TCGCATACAT ACTCTTAATA TTCTTCCCTA TCGTTCTGGA
TATGAAGAAG AAGATCAAAT AATTATTCAA GAACGACTTT ATACAGGTTC TTTAAGCGGA
GTAGTTAGTA CAAGTGCACT TGAACTCGGT TTAGATATAG CAGACTTGAG TGCAGTTGTC
TTATTAGGTG TACCTTATTC ATCAACTAGC TTATTACAAC GCATGGGTCG TGTTGGTCGT
AATTGTCCCG GAACCGTATA TATCATTCAT TCAGGTGATG TTGTTGATGA AGTTGTATTT
AGGAATCCTA AAAGTATATT AGAACGTCCT TTATCAGAAG GTGCATTGTA CCTACAAAAT
CCCCGCATTC AATATATTCA CACCTTGTGC CTTAGTCGTG AGGGCGGTGA GCATGATCAA
TTTTGCCAAG CATTAAAAAT ATCTAATGAT GAAACTGACT TTATTAGTCC AATAAAATGG
CCTGAAGGGT TTATGGTATT ATGTAAGTCT GAGCGTACGG GTGAGTTACC ATCTGATCTT
CAAGCAATGA AATCTGAGGC AAATGATTGT CCCAATAATG TTTTCCCTTT AAGAGATGTA
GAAAGTCAGT TTAAAGTGCA GTTTAAACAA GGCCCTGTAT TAAAAGATAT GGGTTCACTT
TCCTATAGTC AAGCATTAAG AGAAGCTTAT CCTGGAGCAG TTTATTATTA TGCCACAGAG
TCACTGCGAG TATATAAAAT ATTCCAAAAG AATCGTCTTA TTTATGTTAG GAGCGAGAAG
AAGTATACAA CTAACCCTAG TATGCCTCCA TCTCAAGTAT TTCCCAATTT TACAGAGGGA
AATATATATA ATTCCAATAA ATATGGTGAT CTTATGGTAA TTGAAGCAAA TTGTCAGGTT
CGTGAATCTG TTATCGGATT TAAAGAAAAA AGAGGTTCAG CCGAGACTAA GCCATATAAG
TATCCGCTTA CTGGTGATGG CATTAATGTA TTTTTTGATC TCCCACGATT TACAAGAAAC
TACTTTACAA GCGGAGTTGT TTTTACTCAT CCTACGTTCA ATATTGCCAA AACAGATGAA
CTAGGAGCAG TTTCAAGGTT GATTTACGAA GCTTTTTTAA TTTCTATACC ATTTGAACGT
CAAGATTTAG ATGTAGCTTT TGGAAAATTT CGTGTAAAGA GATTACCTTA TATTCAAGAA
GGGAATTATT TTATTGTTAT TTATGATAGA ACATATGGAA GTCTGCGCTT GTCTGGACAT
GTTATGGCTG AAAATCAGAT GGGTACAGTA TTTAAACAAG CATTAGAAAT TGCCAGATTA
AGTGATGAGG TAATGGGACC GGGGGGCGTT TTGCCAGTCA CAGCAGAAGT TATCGCTTTG
TTGGAGACCT TATGTAATGA TGGTTCATTA TCTAAAATGC AAGTTGATTT TGAATCTTCT
ACTGAGACAA TGCCAGATGA AAACCGTTAT GAGAGGATAA TTATGCCTGG AGGAATTGGA
CTTGCTGCTC GTAATAATAA CTCTGAATAT ATAATAGAAA ATATCTTCTT TTATCCAAAA
CAGAAGGAAT TGTGTTATCG GGGAAGATAT TTAACCCAAA GTGAACAGGA TACGGTAAAT
GTTACTTGGC CAGTCAAAGA AATTCGTGAA GTTCCAGGAG AATCTGTAAT TGGGTATTAT
GATTATGAAA CAGGGGAGCT ACTCACTGAT AAATAA
 
Protein sequence
MTNFSYAKYS PIWFIMNRGD NINSFFEIRQ WELVDTILLE SREKCLEPID DLPLSNTTLN 
YIKTFVPGIY LHQKEALKYS IGGYNVCLVT GTASGKSLAF YALGIEKLVA KPSAKIIAIY
PLKALGREQE KRWKNALDAA GINAKVGRID GDVKSMARRK AILKDCQVVI MTPDIIHHWL
LLNISDREIV KFLTNVALFV VDEVHTYTGV FGSNAAFLFR RLRHLIAFTN NTPQFICASA
TMASPEKHLE NLFGVPFHII GSELDTSPRQ EVKIVFLRPH LKGDYLTEIT YFLKELTSIE
RRFIAFVDSR KSAELITSIL SRGHQGREQG ANIEVESDKI TGIIKPDRIH TLNILPYRSG
YEEEDQIIIQ ERLYTGSLSG VVSTSALELG LDIADLSAVV LLGVPYSSTS LLQRMGRVGR
NCPGTVYIIH SGDVVDEVVF RNPKSILERP LSEGALYLQN PRIQYIHTLC LSREGGEHDQ
FCQALKISND ETDFISPIKW PEGFMVLCKS ERTGELPSDL QAMKSEANDC PNNVFPLRDV
ESQFKVQFKQ GPVLKDMGSL SYSQALREAY PGAVYYYATE SLRVYKIFQK NRLIYVRSEK
KYTTNPSMPP SQVFPNFTEG NIYNSNKYGD LMVIEANCQV RESVIGFKEK RGSAETKPYK
YPLTGDGINV FFDLPRFTRN YFTSGVVFTH PTFNIAKTDE LGAVSRLIYE AFLISIPFER
QDLDVAFGKF RVKRLPYIQE GNYFIVIYDR TYGSLRLSGH VMAENQMGTV FKQALEIARL
SDEVMGPGGV LPVTAEVIAL LETLCNDGSL SKMQVDFESS TETMPDENRY ERIIMPGGIG
LAARNNNSEY IIENIFFYPK QKELCYRGRY LTQSEQDTVN VTWPVKEIRE VPGESVIGYY
DYETGELLTD K