Gene Dtox_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3796 
Symbol 
ID8430806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3971861 
End bp3972832 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content44% 
IMG OID645036023 
ProductABC transporter related 
Protein accessionYP_003193126 
Protein GI258516904 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01288] ATP-binding ABC transporter family nodulation protein NodI 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATA AAGTCAGAGA AAAAGTAGTT TATGCCAGGT ATTTGGTAAA GTCTTATGAT 
GGTTTTGAAG CAGTGAAGGG TGTCAATATG GAAGTATACC GAGGCAATTG CTTGGGTCTG
CTGGGTCCTA ACGGTGCAGG GAAAACATCT ATAGTAAAAA TGATTTGCGG TTTTTCCCCG
GTTACTTCAG GCAAACTCGA AGTATTTGGG GAAAATATTA TGTCAAGAGG CAGGAGCATT
AAGGGGAGAA TCGGTGTGGT GCCGCAGGAA GATAACCTGG ATCAGGAGCT GACTGTGCGC
CAAAATCTGA TTGTTTATGC CAGTTATTTT AGGATGAAAA AGGCACTGGC ACTCAAGCGC
TCAGACGAGA TACTGGAGTT TATGGATTTA ACTGAAAAAT CCCGTGAGGT CGTAGATAAC
CTTTCCGGAG GTTTAAAGCG GCGTTTGACT ATAGGGAGGG CGCTGATCAA CAATCCGGAG
CTATTAATTC TGGATGAACC AACTACTGGA TTAGATCCTT ATGCCCGTCA CCTGGTTTGG
CAGCGCTTAA GAAAACTAAA GGAAGCCGGT ACAACCATAC TTTTGACGAC ACACTATTTA
GAAGAGGCTG AGCAGCTTTG TGACATGCTT GTAGTAATTT ATAGGGGTAA AGTCTTGGAG
CAAGGTACGC CGCAGGAACT GGTAGACCGG CATGTTGGTC AAGAGGTTTT AGAGTTAGGA
ATTGCTTCAG AGCATTATGA TTCTCTTTTA AATGGCTGCG AAGAAATGGT TAAAGGCAGT
CAGACATTGG GTGACGATGT GCTTCTCTTT ACTAATCACG GTCGGGAATT ATCCCGGTTG
GTTTCTCAAA AAGCTGCTGA ACTCGGATTG ACCATTAATT ACCGAAGACT CAGAGCCAGT
AATTTAGAGG ATGTATTTTT GAAGCTGACG GGTGAGAGTT TGGATGAAGA ATCCTCCGGT
AATCTTCAGT GA
 
Protein sequence
MSDKVREKVV YARYLVKSYD GFEAVKGVNM EVYRGNCLGL LGPNGAGKTS IVKMICGFSP 
VTSGKLEVFG ENIMSRGRSI KGRIGVVPQE DNLDQELTVR QNLIVYASYF RMKKALALKR
SDEILEFMDL TEKSREVVDN LSGGLKRRLT IGRALINNPE LLILDEPTTG LDPYARHLVW
QRLRKLKEAG TTILLTTHYL EEAEQLCDML VVIYRGKVLE QGTPQELVDR HVGQEVLELG
IASEHYDSLL NGCEEMVKGS QTLGDDVLLF TNHGRELSRL VSQKAAELGL TINYRRLRAS
NLEDVFLKLT GESLDEESSG NLQ