Gene Dtox_3626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3626 
Symbol 
ID8430634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3819978 
End bp3821408 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content45% 
IMG OID645035856 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_003192961 
Protein GI258516739 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000133632 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.124331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGGGA TGTTGAAGGG TAAAATGAAA GGTCTGTTTG GTTTTTGGGT TTTGTTTGCG 
GCCCTGCTCC TGTTGCCTTC CGGTGTGCTG GCAGCTTCCG TAGCTTCAGT CAACGGTGAC
AATATTAATG TCAGGGAGGG ACCTGGTACA ACCTCCGATA TTGTTGGAGA GTTAAATAAG
GGTGATAGTG TTACTGTTCT GGAAAAATCC GGTGATTGGT ACAAGGTTAA GCTGTCTAAC
GGTGACGGTT GGGTTTTAAG CAGTTTTTTA AATCTTAGTG AGCAGAATTC TGACGATTCG
GCAGACTGGC TCTACGCTGG GGCCGGTAGT AACGATAATC AGGTTAAACC TGCTCAAACA
GCTGCAACAG CACAAAAAGA GGTGACTCTG CCTGAATGGC TCCGGCCAAG AGAGGGTAAG
CTTGCATCTG CTGGTAACTC CGGCAGCACC GATAACTCCA ATAACACGGG CAGCACCGGC
AACTCGAACA ACTCCAGTGA TACAAACAAC TCAGGCAGCA AAACCGGGGA ACAGCCTTTT
GTCTGGGACG GGGGGGAACT TACTAAGATA GATGTGTGTG ACAATAGTGA TGAAGTAGTT
GTTACTGTCT ATGCCACAGG TAAAATGCAG TTAAGCGCCT TTACTATTGA CAACCCGTCT
AGATTAGTTT TGGATTTAAC TGGAGTAATA CCGGGGGACA TACCTTCCAC TATGCAAGTA
TCTTCAAATA TTGTTCAGCA AGTTCGCACT GCTTTATATA GCAAGGAACC GGTTAAGTCC
AGAGTTGTGC TTGATTTAAT GAAACAGTCA GGATATAAAA CTACTTTGTC AAGTGACCAA
AAAACCTTAA CTGTTCAGTT AGATAAAGGA CAGCGGACTG TGGTTAAAAG CGGCAAGAAG
CTAATTGCGA TAGATCCCGG ACATGGTGGT AAGGATTGTG GGGCTATCGG TTGTACCGGC
TTATATGAAA AAGATGTAAC CTTGGACGTT TCACGTCAGG TTGTTGACTT GCTGAAGAAC
TCCGGCTATG ACGCTGTGCT GACCAGAACA GATGACACCT ATGTAGGACT TGACGAGAGG
ACTGACTATG CTAACAGCCT GAATGCTGAT TTATTTGTCA GTGTGCATAT AAACTCCAGT
GAAGCACAGA CTCCTTCAGG CACCAGTACT CACTATCGTT CTGAGGAAGG AAAAGTCTTG
AGCACATATA TTCAGTCCGC TCTGATAGCA GGTTTGGGGC GCAAGGACAG GGGAGTTCTA
TATAATAATT TTGCTGTATT GAGAACTTCC AATATGACTT CTGCTTTAGC TGAACTGGCT
TTTATATCTA ACCCGGAGGA AGAGTCCCTG TTGAAAACAG CCGACTTTCG CAGTAAGGCG
GCTCAGGCAA TTGTTCAGGG TATAAATAAT TATTATCGTG ATATTCAGTA A
 
Protein sequence
MYGMLKGKMK GLFGFWVLFA ALLLLPSGVL AASVASVNGD NINVREGPGT TSDIVGELNK 
GDSVTVLEKS GDWYKVKLSN GDGWVLSSFL NLSEQNSDDS ADWLYAGAGS NDNQVKPAQT
AATAQKEVTL PEWLRPREGK LASAGNSGST DNSNNTGSTG NSNNSSDTNN SGSKTGEQPF
VWDGGELTKI DVCDNSDEVV VTVYATGKMQ LSAFTIDNPS RLVLDLTGVI PGDIPSTMQV
SSNIVQQVRT ALYSKEPVKS RVVLDLMKQS GYKTTLSSDQ KTLTVQLDKG QRTVVKSGKK
LIAIDPGHGG KDCGAIGCTG LYEKDVTLDV SRQVVDLLKN SGYDAVLTRT DDTYVGLDER
TDYANSLNAD LFVSVHINSS EAQTPSGTST HYRSEEGKVL STYIQSALIA GLGRKDRGVL
YNNFAVLRTS NMTSALAELA FISNPEEESL LKTADFRSKA AQAIVQGINN YYRDIQ