Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3567 |
Symbol | |
ID | 8430573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 3766771 |
End bp | 3767598 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645035795 |
Product | spermidine synthase |
Protein accession | YP_003192902 |
Protein GI | 258516680 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAATTTT GGTTTACTGA AGATCAAAGC AAAGATTTAA GGATTGGCTG CCGCATACTG GAGACTATAC ACAGTGAAAC AACTCCTTTT CAAAAACTGG CGGTTATTAA TACGGCTCAA TTCGGGCGCA TGCTGGTGCT GGACAATGTA ATACAAACTA CTGTCAAGGA TGAATTTGTT TATCATGAGA TGATTGCGCA TGTAGCCTTA AATACCCACC CCAACCCCAA GAAAGTGCTG ATCATCGGTG GCGGTGACGG TGGTGTGGTT CGTGAAGTGG TTAAACATAC GGGTGTGGAG AAAGTGGTGC ATGTGGAGAT AGACGGCAGG GTTATCGAAG TGTCTAAAAA GTACCTTCCG GAAATCAGTT GCGCTTTGGA TAACCCGAGG GTTGAGGTTA TTATTGATGA CGGAATTAAG CATGTGCAGG AATATAAAGA TACCTATGAT GTAATTATTA TTGATTCTAC TGACCCGGTA GGCCCGGCAG TAGGACTTTT TAGCGCGGAG TTTTACCGGT CTGTCTCTGA GGCATTAACG CAGGACGGAT TATTTGTGGC GCAGACAGAG TCCCCCTTTT ATAACGAGGA ACTAATCACC AGGATACAAA AAGATGTGGC AGACATCTTT CCGGTAACAA GCCTGTACCT GGCATGCGTT CCTACCTATC CTGGCGGTTT GTGGAGCTTT ACTATAGGTT CAAAGATATA TGACCCTCAA AAAGCAGATA CAACCAGGTT TTCTGAGCTT GCCACCAGGT ATTATTCGCC TGTGGTGCAT AAGGCAAGTT TTGTATTGCC CCCTTTTGTT CAAAACCTAT TGAAATAA
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Protein sequence | MEFWFTEDQS KDLRIGCRIL ETIHSETTPF QKLAVINTAQ FGRMLVLDNV IQTTVKDEFV YHEMIAHVAL NTHPNPKKVL IIGGGDGGVV REVVKHTGVE KVVHVEIDGR VIEVSKKYLP EISCALDNPR VEVIIDDGIK HVQEYKDTYD VIIIDSTDPV GPAVGLFSAE FYRSVSEALT QDGLFVAQTE SPFYNEELIT RIQKDVADIF PVTSLYLACV PTYPGGLWSF TIGSKIYDPQ KADTTRFSEL ATRYYSPVVH KASFVLPPFV QNLLK
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