| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3559 |
|---|
| Symbol | |
|---|
| ID | 8430561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 3756887 |
|---|
| End bp | 3759577 |
|---|
| Gene Length | 2691 bp |
|---|
| Protein Length | 896 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 645035783 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003192894 |
|---|
| Protein GI | 258516672 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.450676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAG GACTTGACCA GAAGTTAATA ATGAATATTC ATGAACTTCC CTCCAGGGAT
GCAACTTACG CAAATTTTCC CAGTGGCCTG AAGGAAGACT TAGTCCGTGG GTTGGCTGTT
AACGGAATCA GTAAGCTTTA TTCTCACCAG GCTAAAGCAA TAGAGCAAAT TTTATTGGGC
AGGAATTTAA TTATAACTAC CGGTACTTCC AGCGGTAAGT CCCTGGTTTA TATTGTACCT
GCCATAAATT GCATATTAAA TAACAGCCTC AGTACTGTAC TTTATCTATC TCCTGCTAAA
GCGCTGAGTC AGAACCAGTA TCAAAATATT GAGAAGTTTT GTAAGAAGAT ACTTTGGCCG
GTCAGTGCGC CGGTTATTTC TGTGTGTGAT GGGGATACTC CCCTGGAGGA AAGAAGGGAA
ATTCTAAATC GCTCTAATAT AATTTTCTCA ACGCCGGATT TTTGGCACAG CAGCGGGTTG
TCCAGGCACA TCCATTGGCC AGGTTTTCTG TCTAATTTGC AACTAATTAT TATAGATGAG
GCCCATATCT ACAGAGGATC GCTGGGCAAT CATGTCAGTC ACGTACTGCG AAGGCTGAGA
AGGCTTTGTT ATCACTATGG TTCGTACCCA AGGTTCATTC TTTGCTCGGC TACTATTGCT
AACGCCCTTG AGTTTGCTGA AAACCTGACC GGATTGGATT TTGTCCTGAT AGATAAGGAA
GGTTCCCATA GTGCTAAAAA GAATTTTGTA TTTATCAATC CGCCTCAATA TCAGGATAAA
AATAGCAGCC AAATTAAGCG TAAGCTCAGT CATTACGAAG CTGCCAGGAT AGTAGGTAAT
TATGTGCGCA CCGGCAGGCG GGTGATTAAC TTCGGGCGGT CCAAACAGGT GGTTGAATCA
GCTTATCGCA AACTCATTGA GGAATATCCG GATATTGCCG GCCAGGTTCG TCCTTATAAA
GGAACCTTGA CTCCAGAAAC GCGCCGTGAA ATAGAAGGTA AGCTCTTTGA TGGCATGCTA
AAAGGAATTA TATCTACGAA TGCTCTGGAA CTTGGAGTGG ATATCGGCGA TCTGGATGTT
TGTGTGATGA GCGGTTTTCC GGGCAGTATA TCTTCCGTAT GGCAGCAGGC AGGCAGGGTA
GGGCGGCGGG GTAAAGAATC TCTGGTAGTA TTTGTAGCGG GAGATGACCC GCTCGATCAA
TATCTGATCA GAAAACCGGA ATACTTTTTT TCGCGCCTCT GCGAAAAAGC TGTGGTTAAT
CCTAATAATC TTTCATTCTT ATCGGAACAT TTACTGGCAG CTGCTGCAGA ACTGCCTATT
GTAGTTGAGG ATCGGAAATA CTGGGGTAAT ATTTTAGACA AGGCTGTCTT GCTGTTAAGA
GGTAGCGGAT TAATTAGGCT GGAAAGAATA GGAGAACAGA AAACTTACAG GTTAAACTGC
AGGATGCAGG CTTTTTCCCT GCGCGGAGAT TCCCCCAATT ATCTGATTAA GACGGAAAAC
GGTAAAATAA TAGGGCGTAC TAATTATGAT GATGTGCTGC TGCTGCTTTA TCCCGGGGCT
ATTTTCCTGC AAATGGGCAG GCAGTACAGG GTTTTGCGTG TTGAGGAAAA GAGTAAAGAG
GTAATTGCCG CCGAGTGCGC TTTTTCCTGG AGAAATAAGC GAACAAGACC CTCGATCCGG
GCAAATGTAG CTATAGAGCA GCTTGAGGCC AGCAGCCAGG TGAAGGATGT CAGGGTAAAC
ACTGGCATAC TCACGGTTAA GCGACAGACG GAAGGCTTTA CTCTGTATGA ATACCGGTAC
GGCAAGGGAG AAAGCAAGCT CTCACAGCAC AGTGTTGATT TACCCGCTGT AGATTTAAAA
ACGGTAGGGA TATGGTTGGA AATCGGATCT GAGACAGTAA ATCGCCTGGG CGGGGATTCG
CTTTTACTGG CTCTGCACGG TGTTGAACAT TTGCTGCGGG TGGTTCTCCC GTGGAAAGTT
ATGTGTGAAA GAAACGATAT CGGAGCTTAT ATAGCCGGTC ACGGCAAAGA CGGTGCAACT
CTGTTCCTAT ATGATATTTA CCCCGGAGGT GTAGGTTATT GTGAAGCTGC TTTTAACATG
ATTGAAGAAA TTTTACAAGA ATCGCTTAGT CTTATTGAAA CTTGTAGTTG TAAAAAAGGC
TGTCCCTCGT GTATTCATCT GCCTCAGTGT GAAAAAAGAA ACTCTGACTT GGATAAAGAG
GCAACCAGGG ATTTGCTGCT TCTGTTGCTG GGCAGAGATA CTATAAAAGT ATCCAACTGG
CTGGACAGAA CCATCACTGC TGTCGGCAAG GCTGTTAACC GGGCTGATTT AAGATTATCC
GCTCGCCAGC AGGAGAAAGG CAGTCAGGCA GATTTGCAAG TTAAAGTTGA TCGCCTGGCA
GAGATTTTGG GTAAAATTGA TTTTGATAAA ACTTCGCTAA ATTATATTAC TGACCAGGAC
AAGTTAATTC TGTCTGCTGT ATTTGTTTTG CAGCAACAAC CTTATTTTTT CGTAAGCAGA
GATGATTTGC GCAGTTTATG TAGTAAGATT GCTATTTCTG ATTATGTGAG CAGGCTGAAT
TATTTAAAAA AGCAGGGTTT GATAATTAGA GACAACCCGC CTCAATTGGA TACGTCAACG
CACAGACTCT TGCAGAGTAT GGAAGAGGTT TTCATGAGAG GAAGAGTTTA A
|
|---|
| Protein sequence | MLKGLDQKLI MNIHELPSRD ATYANFPSGL KEDLVRGLAV NGISKLYSHQ AKAIEQILLG
RNLIITTGTS SGKSLVYIVP AINCILNNSL STVLYLSPAK ALSQNQYQNI EKFCKKILWP
VSAPVISVCD GDTPLEERRE ILNRSNIIFS TPDFWHSSGL SRHIHWPGFL SNLQLIIIDE
AHIYRGSLGN HVSHVLRRLR RLCYHYGSYP RFILCSATIA NALEFAENLT GLDFVLIDKE
GSHSAKKNFV FINPPQYQDK NSSQIKRKLS HYEAARIVGN YVRTGRRVIN FGRSKQVVES
AYRKLIEEYP DIAGQVRPYK GTLTPETRRE IEGKLFDGML KGIISTNALE LGVDIGDLDV
CVMSGFPGSI SSVWQQAGRV GRRGKESLVV FVAGDDPLDQ YLIRKPEYFF SRLCEKAVVN
PNNLSFLSEH LLAAAAELPI VVEDRKYWGN ILDKAVLLLR GSGLIRLERI GEQKTYRLNC
RMQAFSLRGD SPNYLIKTEN GKIIGRTNYD DVLLLLYPGA IFLQMGRQYR VLRVEEKSKE
VIAAECAFSW RNKRTRPSIR ANVAIEQLEA SSQVKDVRVN TGILTVKRQT EGFTLYEYRY
GKGESKLSQH SVDLPAVDLK TVGIWLEIGS ETVNRLGGDS LLLALHGVEH LLRVVLPWKV
MCERNDIGAY IAGHGKDGAT LFLYDIYPGG VGYCEAAFNM IEEILQESLS LIETCSCKKG
CPSCIHLPQC EKRNSDLDKE ATRDLLLLLL GRDTIKVSNW LDRTITAVGK AVNRADLRLS
ARQQEKGSQA DLQVKVDRLA EILGKIDFDK TSLNYITDQD KLILSAVFVL QQQPYFFVSR
DDLRSLCSKI AISDYVSRLN YLKKQGLIIR DNPPQLDTST HRLLQSMEEV FMRGRV
|
|---|
| |