Gene Dtox_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3356 
Symboltig 
ID8430350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3561581 
End bp3562888 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content42% 
IMG OID645035590 
Producttrigger factor 
Protein accessionYP_003192709 
Protein GI258516487 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 
TIGRFAM ID[TIGR00115] trigger factor 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.185732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTA CTGTAGACAG GATAGAAAAA AATACTGTTC TGCTGGAAGT TGAAGTGGAT 
CAGGAGCAAT TTTCCCAGGC ATTAAATGAT GCTTATCGTA AAGTTGTAAA GAATGTAAAT
ATTCCGGGCT TTCGTAAAGG GAAAGCACCT AAGAGGGTTA TTGAGCGCTA CTTTGGCAAA
GAAGCTCTCT ATAATGAAGC GGTGGAAGCT ATTATACCCG ATGCCTACAT GAAAGCTGTT
GAGGAACAAA ATATATTTCC CATTGACCAG CCCCAGATGG AATTGGTTCA AGTTGAAGAG
GGCAAGCCCG TAATCTTTAA GGCTACGGTC ACAGTTAAGC CTGAAGTGGA ATTAGGCCAG
TACACTGATT TGGAACTGGT CAGGCCTGTA ATAGAAGTTG CGGAAGAAGA TTTGGCCAAA
GAACTTGAAG CTCTGCAAAA CCGCTATGCT AAATTGATCA ACCTGGATGA AGGACAGGTG
CAGGACGGGG ATACTGTAAT TATGGATTTT GTCGGTAAAG CAGACGGCGA AGAATTTGCC
GGTGGCAAAG CCCAGGATTA TTCCCTGCAA ATAGGATCAA GCAGCTTTAT TGCCGGTTTT
GAAGAGCAAA TGGTAGGGAT GTCCTCCGGA GAGACTAAAG AAATTAATGT TACCTTCCCG
CAGGATTATC ATGCAGAGAA TTTAGCCGCT AAAGACGCGG TATTTACGGT AACTGTTAAA
ACCATCAAGC GTAAAGATAT AGCTCCCCTT GACGATGAGT TTGCCAAAGA TGTCAGCGAG
TTTGACACGC TGGAGGAATT AAAGGAAGAC TTGCTGAATA AATTAAAGCT AAATGCTGAG
ACACAAGTAC AGCAAAGTTT AGAAGATCAA GCAGTTGATA AGGTTGTAGC CAACGCCGAA
GCGGAAATAC CTGAAGTAAT GATTAATGCT CAGATAGATG ACATGATGTC TAATATGGAA
CACAGGCTGA TGGCGCAAAA AGTTTCTCTT GACGATTATT TGAAATTTAC CAATTCCAGC
AGAGAGCAGA TGAGAGCGGA ACTGCGTGTT GATGCGGAAA AAGCTGTTAA GACCAGTCTT
GTATTAGAAG CTATCGGCAA AGCTCTGAGT GTTGAGGCGA CTGAAGAAGA AGTAAACGAA
GCATTTGAAA ATTTAAGTAA GCAGTATAAC CAGGATGCCG AGATTCTGCG CAAGATTATG
AAAAGCCAGG GAAGATATGA AGTTTTTGTT GAGGGTATTC AACGTGAAAA AACGGTTAAG
TTAATAATAG AGAAATCCAA TATAGTTGAG CAGGCTGCAG CCGAATAA
 
Protein sequence
MKATVDRIEK NTVLLEVEVD QEQFSQALND AYRKVVKNVN IPGFRKGKAP KRVIERYFGK 
EALYNEAVEA IIPDAYMKAV EEQNIFPIDQ PQMELVQVEE GKPVIFKATV TVKPEVELGQ
YTDLELVRPV IEVAEEDLAK ELEALQNRYA KLINLDEGQV QDGDTVIMDF VGKADGEEFA
GGKAQDYSLQ IGSSSFIAGF EEQMVGMSSG ETKEINVTFP QDYHAENLAA KDAVFTVTVK
TIKRKDIAPL DDEFAKDVSE FDTLEELKED LLNKLKLNAE TQVQQSLEDQ AVDKVVANAE
AEIPEVMINA QIDDMMSNME HRLMAQKVSL DDYLKFTNSS REQMRAELRV DAEKAVKTSL
VLEAIGKALS VEATEEEVNE AFENLSKQYN QDAEILRKIM KSQGRYEVFV EGIQREKTVK
LIIEKSNIVE QAAAE