Gene Dtox_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3340 
Symbol 
ID8430334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3543333 
End bp3544034 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content42% 
IMG OID645035575 
ProductDNA repair protein RadC 
Protein accessionYP_003192694 
Protein GI258516472 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000661948 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTTTTT TGGAATCCGG TTACCGTTTA ACCATTAGAG AAATGCCTGC CGATTTGCGG 
CCACGGGAAA GACTTCTTAA TGAAGGGGTA GAAACTCTGT CTGAAATTGA ACTCCTGGCC
ATACTGCTGA GAACCGGGAC TGCTTCTGTT TCAGCTATCG AACTGGCAAC CATTATTCTG
ACCGGTTTTC AAGGTTTAAG ATCTTTAATG GATGCTACAG TGCAGGAATT AAATGAGATT
AAAGGTATTG GTTTGGCCAA AGCCGCTCAA ATAAAAGCCG CACTGGAGCT GGGTAAACGT
ATGGCTTTGA AAACTATGGA GGACAAGCCT CTTATTAAGA GTCCGGAAGA TGTTGCGGGA
CTGGTTATGG AGGATATGCG CTATTTAGAC AGGGAGTACT TCAGGGCCAT GCTTTTAAAT
ACTAAGAACC GCGTCTTGAG TTTGGAAACT ATTTCAGTCG GTACCTTAAG TTCTTCCGCT
GTGCACCCGC GGGAGCTATT TAAAATAGCA ATTAAAAAGA GCGCGGCTGC TTTAATTCTC
ATTCATAATC ATCCCAGCGG TGATCCGGCT CCCAGTAAAG AAGATATTGA TGTGACCAAA
AGGCTTGAAG AAGCGGGGAA AATTATCGGC ATAGATGTCT TAGATCATAT AATTATTGGA
GATAATAAAT TTGTAAGTTT GAAGGTAAAA GGATTATTCT AA
 
Protein sequence
MFFLESGYRL TIREMPADLR PRERLLNEGV ETLSEIELLA ILLRTGTASV SAIELATIIL 
TGFQGLRSLM DATVQELNEI KGIGLAKAAQ IKAALELGKR MALKTMEDKP LIKSPEDVAG
LVMEDMRYLD REYFRAMLLN TKNRVLSLET ISVGTLSSSA VHPRELFKIA IKKSAAALIL
IHNHPSGDPA PSKEDIDVTK RLEEAGKIIG IDVLDHIIIG DNKFVSLKVK GLF