Gene Dtox_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3330 
Symbol 
ID8430324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3534227 
End bp3534997 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content48% 
IMG OID645035565 
ProductPeptidase M23 
Protein accessionYP_003192684 
Protein GI258516462 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0172603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAA TAATATATGG GTTTAGAAAC TGGCTGCGCA GAAGAAGGAA GCCGTTATAC 
AGCAGTGATG ATTGGGGAGC TTATGCTAAT CTGCCCCAAC CCGGGAAGAG TTGTGCTAAG
AAAAAGACTT TCGGCAGGCG ATTGTTTTCG AGAACTGTTT GGGCTGCGGT AATCCTCTTA
TCTATATTGG CTTTGCGGGA GCTGCCTGAC CCGCTGGGAC AAAAGATAAA AACCGATCTG
CGCTATTTAC TGACCACTGA GTGGGATTAT CAGCCTGTAG TGCAAAAAGT TGTGCAGTTG
GGACTCAGAT TGGCCAATGT GGACAGCAAT GAAATAACGG TACCCGTATT TGTTCCGCAA
AAAAACAGCC ATGGTTTGCC CCTGCCGGTT TCAGGCCGTC TGGTAAAGAA TTTTGGCTGG
GTAAAAGATG ATCTGGACGG TATGGAACGT TATCATGCCG GAATTGATAT TGCCACAGGC
GAGAAGGCCC TGGTACAGGC GGTAATGGAT GGTGCCGTGA AGAAAAGCGG CAAAGACGCT
TGTTTGGGGG AATACCTGCT TTTGGAGCAC AACAACGGGA TTACCACCTT ATACGCCCAG
CTCCAGAATA TTTCCGTCAA AGAAGGCGAT CAGGTTAAAA GCGGGCAGGT TATTGGTGAA
GCCGGTACTG TGGGAGATAT AAAAGGTTTC GGTCTGCACT TTGAGATGCG GGAAGACAAA
AAACTGGTTG ATCCCCTAAA AAAACTGCAG TTTTCCGGGC AGGCCTGGTA G
 
Protein sequence
MKKIIYGFRN WLRRRRKPLY SSDDWGAYAN LPQPGKSCAK KKTFGRRLFS RTVWAAVILL 
SILALRELPD PLGQKIKTDL RYLLTTEWDY QPVVQKVVQL GLRLANVDSN EITVPVFVPQ
KNSHGLPLPV SGRLVKNFGW VKDDLDGMER YHAGIDIATG EKALVQAVMD GAVKKSGKDA
CLGEYLLLEH NNGITTLYAQ LQNISVKEGD QVKSGQVIGE AGTVGDIKGF GLHFEMREDK
KLVDPLKKLQ FSGQAW