Gene Dtox_3306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3306 
SymbolleuS 
ID8430300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3509917 
End bp3512403 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content54% 
IMG OID645035541 
Productleucyl-tRNA synthetase 
Protein accessionYP_003192660 
Protein GI258516438 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0495] Leucyl-tRNA synthetase 
TIGRFAM ID[TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000102477 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGC GATACAACTT TGAGGAAATT GAGTCCAAGT GGCAGAAAAT ATGGGCCGGG 
AACGACCAGT ATGCCACGGC TGACTTTTCG GAACGTCCCG AATATTATTG TCTGGAAATG
TTCCCCTATC CATCGGGCAA CTTGCATATG GGCCATGTGC GCAACTACTC CATTGGTGAT
GTGGTGGCCC GTTTTAAGTC CATGCGCGGC TTTGATGTCC TGCACCCTAT GGGCTGGGAT
GCTTTCGGGC TGCCGGCGGA GAACGCGGCC ATCAAGCACG GCAACATGCA CCCGGCTGAT
TGGACCTTTG CCAATATTGA CAACATGCGG ACGCAGTTAA AGCAGCTGGG CCTCAGCTAT
GACTGGAACC GTGAGGTGGC TACCTGTCAT CCCGGCTATT ACAAGTGGAC ACAGTGGCTT
TTCCTGCAAT TATACCATCA TAATCTGGCA TATAAAAAAT ATGCCGCCGT TAACTGGTGT
CCTTCCTGTG CTACCGTGCT GGCTAACGAA CAGGTAAAAG AAGACGGCTG TGAGAGGTGC
GGCACAACGG TAGAAAAGAA AAACCTGGAC CAGTGGTTTT TCAAAATTAC CGACTATGCC
GAGCGGCTGC TGGCAGATCT GGACAAGCTG CCGGGCTGGC CGGAAAAAGT TAAAATCATG
CAAAGAAACT GGATCGGCCG CAGCGAAGGG GCGGAGCTTA CCTTTCAGGT GAAAGACAGC
CAGGAAAGCA TCACCGTCTA TACCACCAGG CCCGATACGG TTTTCGGGGT CAGCTGCATG
GTGCTGGCGC CTGAACACCC GCTGGTGGAA AAGCTCATCG CGGGGACAGA GCAGGAGCGG
CAAGTCAAAG ACTTTGTGGC AAAGATGCGC GCTTTGAGCG ATGCGGACCG CACTTCCGAC
GAGGCGGAAA AAATCGGTGT CTTGACCGGG GCCTGCTGCA TTAACCCCTT TAACGGTGAT
CAAGTGCCCA TTATGGTAGC CAACTATGTT TTGCTGGAAT ACGGCACCGG CTGCGTTATG
GGCGTACCGG CACACGACCA GAGAGACTTT GAGTTTGCCG CCAAGTACAA GCTGCCGGTA
AAAGTAGTTA TTCAGCCGGC GGGTGAGAGC CTGGATCCTG CCAAAATGCA GCGGGCCTAT
GTAGATGAAG GCTTTCTGGT GAATTCCGGG CAGTTTGACG GAATGGGCAG CTCCGACGCT
ATCCGGGCCA TCACTGCTTT TGCTGAAGAA AAGGGCATAG GCAGCGGCAA GGTCAATTTC
CGATTGCGTG ACTGGCTGAT TTCCCGCCAG CGCTACTGGG GAGTGCCTAT CCCCATTATC
TATTGTGAGC AGTGCGGCAA TGTACCGGTA CCGGAAAAGG ATTTACCGGT AATGCTGCCT
TATGACGTGC AGTTTAAGCC GGCCGGGCGT TCTCCCCTGG CAGACCGCGA GGAATTTGTC
CACACAGTTT GCCCGTCCTG CGGCGGTCCG GCCCGGCGGG AAACCGACAC TATGGATACC
TTTGTCTGCT CTTCCTGGTA TTTTTACCGT TATACCAGCC CCCGGGACGA AGCGCGGGCC
TGGGATAAGG CCAAAGCAGA TCGCTGGATG CCGGTGGATC AGTATATCGG AGGTGTGGAG
CACGCCATAC TTCATTTGCT CTATGCCAGG TTCTTTGCCA AGGTTTTTTA TGACTTAAAG
CTGATCAGTG CGGAGGAGCC TTTTGAAAAC CTGCTCACTC AGGGCATGGT CTTAAAGGAA
GGCGCAAAAA TGTCCAAATC CAAGGGCAAT GTAGTCAGTC CCGAGGAAAT TATTAAGCGC
TACGGTGCGG ACACAGCCAG GCTGTTTATT CTGTTTGCCG CCCCGCCGGA AAGAGACCTG
GAGTGGAGCG ACCAGGGCGT GGAAGGCAGC TACCGTTTCT TAAACCGTGT CTGGCGTCTG
GTCACGCCGC TGGCCGCGGA TTTGCTCAAG GCCCCGGTCA AGCCGGAAGG TGAGGTAAGC
GGCGTGCATA AAGAAATGCG CCGGTTGAGC CACTACACCA TAAAAAAGGT GACAGAGGAC
ATAGAAGAGC GCTTCAACTT CAACACCGCT GTCAGCGCCA TTATGGAACT GGTTAACGGT
CTCTATCATT ACCGCGACAA GCTGGCGGAA CCGGACCGCG ATCCGGCCGT GATGAGAGAA
GCCATAGAGG CCCTGCTGGT GCTGCTGTCT CCTTTTGCAC CACATTTGGC CGAGGAACTA
TGGTCAGGCA TCGGCCACAA AGACAGCGTA CACGCACAGC CCTGGCCGGT TTACGAACCG
GAAGCACTGG TGGAAGATGA AATTGAGATA GTGGTGCAAA TAAACGGCAA GGTAAGAGAC
CGCCTCTCCG TGCCGGCCAA CCTGAGTGCC GCGTCAATGC AGGAATATGT CCTGCAGCAG
CCCAAAATTA TCTCCTTAAC AGCCGGCAAA GAGGTTAAAA AAATCATTCC TGTACCGGGC
AAATTGGTGA ATATAGTGGT GAAGTAA
 
Protein sequence
MNERYNFEEI ESKWQKIWAG NDQYATADFS ERPEYYCLEM FPYPSGNLHM GHVRNYSIGD 
VVARFKSMRG FDVLHPMGWD AFGLPAENAA IKHGNMHPAD WTFANIDNMR TQLKQLGLSY
DWNREVATCH PGYYKWTQWL FLQLYHHNLA YKKYAAVNWC PSCATVLANE QVKEDGCERC
GTTVEKKNLD QWFFKITDYA ERLLADLDKL PGWPEKVKIM QRNWIGRSEG AELTFQVKDS
QESITVYTTR PDTVFGVSCM VLAPEHPLVE KLIAGTEQER QVKDFVAKMR ALSDADRTSD
EAEKIGVLTG ACCINPFNGD QVPIMVANYV LLEYGTGCVM GVPAHDQRDF EFAAKYKLPV
KVVIQPAGES LDPAKMQRAY VDEGFLVNSG QFDGMGSSDA IRAITAFAEE KGIGSGKVNF
RLRDWLISRQ RYWGVPIPII YCEQCGNVPV PEKDLPVMLP YDVQFKPAGR SPLADREEFV
HTVCPSCGGP ARRETDTMDT FVCSSWYFYR YTSPRDEARA WDKAKADRWM PVDQYIGGVE
HAILHLLYAR FFAKVFYDLK LISAEEPFEN LLTQGMVLKE GAKMSKSKGN VVSPEEIIKR
YGADTARLFI LFAAPPERDL EWSDQGVEGS YRFLNRVWRL VTPLAADLLK APVKPEGEVS
GVHKEMRRLS HYTIKKVTED IEERFNFNTA VSAIMELVNG LYHYRDKLAE PDRDPAVMRE
AIEALLVLLS PFAPHLAEEL WSGIGHKDSV HAQPWPVYEP EALVEDEIEI VVQINGKVRD
RLSVPANLSA ASMQEYVLQQ PKIISLTAGK EVKKIIPVPG KLVNIVVK